Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 AC010928.2-201ENST00000588017 287 ntBASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 AC103858.2-201ENST00000621471 543 ntBASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 MIR4272-201ENST00000635924 64 ntBASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC163A0A0D9SF12 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-487P-201ENST00000365430 104 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 Y_RNA.358-201ENST00000365491 99 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 MTCYBP2-201ENST00000407745 171 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RN7SKP111-201ENST00000410349 271 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC114482.1-201ENST00000418010 247 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AL590135.1-201ENST00000422215 156 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AL358453.1-201ENST00000422522 250 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC019205.3-201ENST00000424573 156 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RPL23AP95-201ENST00000426806 265 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 Z98742.2-201ENST00000431564 187 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC016700.2-201ENST00000446011 156 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 MTND5P22-201ENST00000458380 195 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 MTATP8P1-201ENST00000467115 207 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RPL36AP48-201ENST00000485521 314 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC093331.1-201ENST00000521474 169 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC124312.5-201ENST00000604451 268 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AL137843.1-201ENST00000605078 385 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 U2.1-201ENST00000618978 145 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
CCDC163A0A0D9SF12 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-874P-201ENST00000362390 105 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-529P-201ENST00000363383 104 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 SNORD14.1-201ENST00000365609 90 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-541P-201ENST00000384709 110 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 RPL23AP58-201ENST00000440453 469 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC091179.1-201ENST00000461606 579 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC090877.1-201ENST00000561418 344 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC104581.2-201ENST00000572227 430 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 MIR5188-201ENST00000583467 113 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AC012493.2-201ENST00000595083 291 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 SNORA43.4-201ENST00000629559 138 ntBASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC163A0A0D9SF12 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC002543.1-201ENST00000299783 1954 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 Y_RNA.106-201ENST00000363189 100 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 Y_RNA.455-201ENST00000384230 98 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 UBA52P6-201ENST00000399822 382 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 MIR1289-1-201ENST00000408836 144 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 DPH3P2-201ENST00000422618 250 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC078809.1-201ENST00000427601 140 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC011742.1-201ENST00000431448 434 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 OSTCP8-201ENST00000445117 448 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 MTCO3P8-201ENST00000453691 755 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 snoU13.6-201ENST00000458785 104 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 RPL22P13-201ENST00000493291 347 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 MRPS36P2-201ENST00000512569 299 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 VN1R91P-201ENST00000594377 169 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AC008739.2-201ENST00000597006 317 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 SCARNA4-201ENST00000629045 128 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 GABRG2-229ENST00000641017 3628 ntBASIC3.62□□□□□ -1.83
CCDC163A0A0D9SF12 AL353743.1-202ENST00000431724 1695 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms