Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AC025678.1-201ENST00000567861 338 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 MTCYBP33-201ENST00000575007 1130 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 AC090330.1-201ENST00000588646 764 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 BNIP3P9-201ENST00000603714 553 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-87P-201ENST00000607561 108 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 AL451064.1-201ENST00000607718 471 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 AP001596.2-201ENST00000608410 312 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 MTND4P21-201ENST00000453886 1357 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 AC245060.5-201ENST00000610778 3293 ntBASIC0.27□□□□□ -2.37
TRAV12-3A0A0B4J271 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-1019P-201ENST00000364424 107 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-910P-201ENST00000390844 107 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RPL21P1-201ENST00000399532 476 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RNA5SP247-201ENST00000411181 105 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 DPRXP1-201ENST00000426312 460 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL008629.1-201ENST00000438615 184 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 FTH1P25-201ENST00000447665 469 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 HMGB1P30-201ENST00000492455 606 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AC067942.3-201ENST00000512025 362 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 SNORA31.4-201ENST00000516049 129 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 MIR4789-201ENST00000577469 82 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL512605.2-201ENST00000592972 256 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL391001.1-201ENST00000602747 715 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AL078603.1-201ENST00000603824 313 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AC100814.1-201ENST00000606963 623 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-212P-201ENST00000362642 104 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 MIR499A-201ENST00000384903 122 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 RAP1BP3-201ENST00000407180 549 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 RNA5SP390-201ENST00000410191 113 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC123900.1-201ENST00000420390 96 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 RAB28P5-201ENST00000427490 651 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AL591212.2-201ENST00000433923 257 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC098869.1-201ENST00000481627 292 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 SNORA31.2-201ENST00000516019 134 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC091163.3-201ENST00000518269 1144 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC018659.1-201ENST00000551083 169 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AL442163.3-201ENST00000554110 156 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AC105148.1-201ENST00000604961 409 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AL353765.1-201ENST00000605514 183 ntBASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV12-3A0A0B4J271 ELL2P3-201ENST00000457883 1602 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 CDR1-202ENST00000625883 1485 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU4-12P-201ENST00000365233 139 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 SNORA50A-201ENST00000384225 134 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-16P-201ENST00000384385 107 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 SNORD65.1-201ENST00000390889 71 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 MTND4LP7-201ENST00000431728 294 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 LARP1BP3-201ENST00000437229 869 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 NEFMP1-201ENST00000443423 1006 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 MTND1P31-201ENST00000449206 961 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 HMGB1P28-201ENST00000507778 552 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-583P-201ENST00000516012 92 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNA5SP255-201ENST00000516370 107 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 SLC2A13P1-201ENST00000531560 322 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC087897.1-201ENST00000550134 156 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AL159153.1-201ENST00000619688 317 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 MIR6513-201ENST00000621188 64 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 AC023934.1-201ENST00000574529 2389 ntBASIC0.24□□□□□ -2.37
TRAV12-3A0A0B4J271 RNA5SP259-201ENST00000365541 109 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC005094.1-201ENST00000440420 368 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC114878.1-201ENST00000441166 358 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 MTND5P14-201ENST00000441481 1267 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC003071.1-201ENST00000451219 789 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 RPS26P45-201ENST00000471748 340 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC104563.1-201ENST00000476147 376 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 SNORD79.1-201ENST00000516069 84 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC091489.2-201ENST00000566263 604 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC068790.6-201ENST00000602558 258 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 MIR3976-201ENST00000606807 139 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC068787.1-201ENST00000623908 691 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms