Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC126544.2-201ENST00000625174 749 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC095038.3-201ENST00000634439 195 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AL133216.2-202ENST00000634512 349 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-212P-201ENST00000362642 104 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 SNORD3E-201ENST00000362899 217 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 Y_RNA.116-201ENST00000363292 103 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 Y_RNA.122-201ENST00000363331 96 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-1080P-201ENST00000383982 107 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-1257P-201ENST00000384625 110 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC092809.3-201ENST00000415453 231 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 KATNBL1P3-201ENST00000443475 909 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC007327.1-201ENST00000447461 264 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC093899.1-201ENST00000457984 376 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RPL31P3-201ENST00000458430 332 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-113P-201ENST00000516653 101 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC091135.1-201ENST00000585943 307 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-88P-201ENST00000606801 100 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC131235.4-201ENST00000609288 620 ntBASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV3A0A0B4J244 AC027514.1-201ENST00000588561 1603 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 OR4G1P-203ENST00000641984 1631 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-1187P-201ENST00000364771 110 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-946P-201ENST00000383878 107 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-413P-201ENST00000384115 107 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RPL21P1-201ENST00000399532 476 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RNU2-62P-201ENST00000410868 191 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 ELOCP17-201ENST00000414751 326 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 ELOCP9-201ENST00000418624 239 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC123900.1-201ENST00000420390 96 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 HSPE1P9-201ENST00000440046 311 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC007969.2-201ENST00000441891 191 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RPS27AP8-201ENST00000452665 445 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC006026.2-201ENST00000457376 180 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC134050.1-201ENST00000495088 933 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC112206.3-201ENST00000514578 389 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 SNORA31.16-201ENST00000516773 139 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC068587.4-201ENST00000533893 186 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 BNIP3P6-201ENST00000549284 499 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC109446.2-201ENST00000567872 497 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 MIR5094-201ENST00000578766 85 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC112220.3-201ENST00000605502 502 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC063943.3-201ENST00000615562 356 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 MIR8063-201ENST00000621930 81 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 RMST_7.1-201ENST00000621935 268 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
TRAV3A0A0B4J244 SNORD114-27-201ENST00000363766 70 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 SNORA63D-201ENST00000364359 132 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-1-201ENST00000383898 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-26P-201ENST00000383985 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-36P-201ENST00000384172 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-4P-201ENST00000384205 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-5P-201ENST00000384238 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-3P-201ENST00000384314 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-2-201ENST00000384627 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-9-201ENST00000384776 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6-33P-201ENST00000384793 107 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 ERHP2-201ENST00000402323 299 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC245047.4-201ENST00000433189 144 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AL008629.1-201ENST00000438615 184 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 Z73417.1-201ENST00000447373 778 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 snoU109.2-201ENST00000459316 135 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 Y_RNA.673-201ENST00000516306 88 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 CENPUP1-201ENST00000526649 1202 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 AC008015.1-201ENST00000555505 465 ntBASIC0.68□□□□□ -2.3
TRAV3A0A0B4J244 CYP3A52P-201ENST00000563326 91 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms