Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RNU6-321P-201ENST00000410912 106 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC016831.2-201ENST00000417179 352 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 LARP1BP3-201ENST00000437229 869 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC245047.7-201ENST00000440265 293 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 ATP5J2P3-201ENST00000451550 258 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC113410.1-201ENST00000505029 247 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC091163.3-201ENST00000518269 1144 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 CR383656.8-201ENST00000549046 145 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 BNIP3P6-201ENST00000549284 499 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 AC025678.1-201ENST00000567861 338 ntBASIC0.11□□□□□ -2.39
TRAV13-2A0A0B4J235 OR4G1P-203ENST00000641984 1631 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 MIR96-201ENST00000362288 78 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 RNU6-862P-201ENST00000362804 105 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AL359634.1-202ENST00000404721 284 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 COX6CP10-201ENST00000416832 224 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AL591212.2-201ENST00000433923 257 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 Z73417.1-201ENST00000447373 778 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 RPF2P2-201ENST00000504693 896 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 RN7SKP12-201ENST00000516275 143 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AL512605.2-201ENST00000592972 256 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 KC877982.1-201ENST00000602313 470 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AC017083.3-201ENST00000609955 700 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AC243773.3-201ENST00000613270 256 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 AC005858.4-201ENST00000623191 700 ntBASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
TRAV13-2A0A0B4J235 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-1123P-201ENST00000362347 106 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-952P-201ENST00000391164 108 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 MTCO3P29-201ENST00000432119 779 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC105758.1-201ENST00000506038 399 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC067942.3-201ENST00000512025 362 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-143P-201ENST00000516942 93 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 ZNF971P-201ENST00000562068 1249 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 MTATP6P3-201ENST00000581686 676 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC136443.5-201ENST00000603741 370 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AL358072.1-201ENST00000604156 575 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC092106.3-201ENST00000611308 722 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC021506.2-201ENST00000612354 169 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC010975.3-201ENST00000618727 978 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC120349.2-201ENST00000625002 298 ntBASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV13-2A0A0B4J235 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 SNORA80D-201ENST00000384488 135 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 ELOCP9-201ENST00000418624 239 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 RPS3AP37-201ENST00000419176 745 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC011233.1-201ENST00000422812 283 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 FO393414.1-201ENST00000428697 1184 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC069257.2-201ENST00000441819 155 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 RNFT1P2-201ENST00000443064 757 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 MTCYBP1-201ENST00000454315 1119 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC233266.1-201ENST00000454518 96 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 RPS26P48-201ENST00000491713 339 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC108740.1-201ENST00000498629 225 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC005741.1-201ENST00000511094 432 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC010587.2-201ENST00000511727 448 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC024589.1-201ENST00000512207 263 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 SNORA68.3-201ENST00000515906 83 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 MIR449C-201ENST00000516047 92 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-496P-201ENST00000516145 99 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 MIR4709-201ENST00000577272 72 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 MIR5000-201ENST00000577717 103 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 BNIP3P9-201ENST00000603714 553 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC016727.2-201ENST00000603988 621 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC012557.2-201ENST00000605919 418 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC242852.1-201ENST00000612151 96 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AL159153.1-201ENST00000619688 317 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 AC244015.1-201ENST00000622301 99 ntBASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV13-2A0A0B4J235 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 SNORA4.2-201ENST00000365313 147 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-16P-201ENST00000384385 107 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6-14P-201ENST00000384630 106 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNA5SP390-201ENST00000410191 113 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 ARL5AP1-201ENST00000418991 388 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 MTND4LP14-201ENST00000429447 288 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 USP9YP14-201ENST00000430663 563 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 AC073910.1-201ENST00000445047 438 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RNU7-136P-201ENST00000458819 69 ntBASIC0.07□□□□□ -2.4
TRAV13-2A0A0B4J235 RPL39P36-201ENST00000490784 156 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms