Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SUB1P4-201ENST00000566062 339 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 HMGN1P30-201ENST00000589286 268 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC234772.3-201ENST00000602277 528 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AP000811.1-201ENST00000603803 651 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL022161.1-201ENST00000604390 213 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC091304.9-201ENST00000612091 226 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC009159.2-201ENST00000617603 606 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL445523.1-201ENST00000451184 1362 ntBASIC0.95□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SNORD33-201ENST00000362761 85 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-23P-201ENST00000363283 107 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SNORD14B-201ENST00000364533 90 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC098592.1-201ENST00000419352 333 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL589872.1-201ENST00000426602 288 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL365184.2-201ENST00000431139 435 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 MTND1P26-201ENST00000440488 538 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 ZNF114P1-201ENST00000453500 292 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC006026.2-201ENST00000457376 180 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU7-125P-201ENST00000458760 62 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SNORD11.1-201ENST00000459482 85 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC005908.1-201ENST00000468701 347 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RPL30P12-201ENST00000474666 353 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 MTND1P3-201ENST00000484956 952 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNVU1-2-201ENST00000516326 135 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-677P-201ENST00000516914 101 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC022616.6-201ENST00000520479 119 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AP000907.2-201ENST00000530827 353 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC023050.2-201ENST00000544968 387 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC092325.1-201ENST00000566449 554 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC002400.1-201ENST00000569310 726 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC005668.1-201ENST00000571142 476 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC137800.2-201ENST00000574375 120 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC005786.1-201ENST00000588553 154 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 VN1R82P-201ENST00000601481 356 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL360219.1-201ENST00000610230 366 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 MIR6078-201ENST00000611069 100 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC130324.3-201ENST00000614165 542 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL121890.5-201ENST00000620848 304 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC007792.1-201ENST00000623023 402 ntBASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.94□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU4-21P-201ENST00000362802 126 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-942P-201ENST00000363002 107 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-414P-201ENST00000363705 104 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-944P-201ENST00000364023 107 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNY3P13-201ENST00000365542 102 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 MIR618-201ENST00000385287 98 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 FGF7P8-201ENST00000402994 292 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 Y_RNA.595-201ENST00000410403 105 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-195P-201ENST00000411352 109 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC016831.2-201ENST00000417179 352 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC139712.2-201ENST00000424302 339 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 FTH1P12-201ENST00000432137 551 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC000111.3-201ENST00000433478 193 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL591212.2-201ENST00000433923 257 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL512286.1-201ENST00000439244 400 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 TAF9P1-201ENST00000445421 515 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 TAF9P2-201ENST00000454958 515 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL139824.2-201ENST00000458731 1095 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RPL30P6-201ENST00000475925 342 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC098862.1-201ENST00000504991 413 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 MTCO3P9-201ENST00000506989 781 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC005178.1-201ENST00000508392 440 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 RNU6-914P-201ENST00000516749 109 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 SNORA31.17-201ENST00000516953 127 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 LRRC34P1-201ENST00000542742 915 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AP001004.1-201ENST00000582468 324 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL391001.1-201ENST00000602747 715 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC105148.1-201ENST00000604961 409 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AL451064.1-201ENST00000607718 471 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC027807.2-201ENST00000616099 408 ntBASIC0.93□□□□□ -2.26
IGKV1D-43A0A0B4J1Z2 AC022960.3-201ENST00000619794 441 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms