Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC187A0A096LP49 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC187A0A096LP49 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC187A0A096LP49 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC187A0A096LP49 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC187A0A096LP49 PWAR6-201ENST00000552334 4618 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 SNORD62.1-201ENST00000362541 86 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU6-898P-201ENST00000365627 104 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU6-472P-201ENST00000384299 107 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.473-201ENST00000384333 102 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 MTND2P29-201ENST00000438595 412 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 HIGD1AP2-201ENST00000446367 280 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AL031274.1-201ENST00000450334 232 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AC006026.2-201ENST00000457376 180 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU7-23P-201ENST00000459465 62 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU6-408P-201ENST00000515910 100 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU6-470P-201ENST00000515954 104 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 RNU1-54P-201ENST00000517181 120 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AP006245.1-201ENST00000522549 120 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AP004607.1-201ENST00000524456 203 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AL035425.3-201ENST00000564206 4996 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC187A0A096LP49 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC005592.1-201ENST00000566527 1640 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 SNORA80A-201ENST00000363922 136 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 RNU5E-7P-201ENST00000365290 117 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 CD24P4-201ENST00000382840 243 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.396-201ENST00000383949 103 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.594-201ENST00000410373 140 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 RNU6-1050P-201ENST00000410388 107 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 RNU4-61P-201ENST00000411243 107 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 HMGN2P10-201ENST00000448085 265 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC068781.1-201ENST00000488231 618 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.661-201ENST00000516003 99 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 RNU6-120P-201ENST00000516077 103 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.680-201ENST00000516441 93 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 RN7SKP40-201ENST00000517211 242 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC023442.1-201ENST00000531247 422 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 HMGN2P15-201ENST00000585707 270 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 MIR7106-201ENST00000612419 65 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 MIR6128-201ENST00000615528 109 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 CDC27P3-201ENST00000635418 1910 ntBASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC187A0A096LP49 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-490P-201ENST00000362985 107 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.106-201ENST00000363189 100 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-238P-201ENST00000363313 106 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.447-201ENST00000384184 113 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-823P-201ENST00000391042 103 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-101P-201ENST00000410323 104 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AL117339.3-201ENST00000418733 162 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 DPH3P2-201ENST00000422618 250 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RPS15AP10-201ENST00000432472 382 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AL353705.1-201ENST00000433468 480 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 AC112492.4-201ENST00000456549 352 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 SNORD5.1-201ENST00000458800 75 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-1037P-201ENST00000459571 107 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU6-475P-201ENST00000516073 104 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 RNU4-77P-201ENST00000516692 156 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 Y_RNA.708-201ENST00000516950 96 ntBASIC3.11□□□□□ -1.91
CCDC187A0A096LP49 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms