Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MTND4P29-201ENST00000503122 1372 ntBASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.58-201ENST00000362807 102 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.154-201ENST00000363624 102 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RNY3P1-201ENST00000365085 102 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RNY3-201ENST00000365484 102 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 MIR518D-201ENST00000385014 87 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 MIR548F5-201ENST00000408421 86 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RN7SKP158-201ENST00000410453 326 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 PGBD4P6-201ENST00000421501 610 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL590632.1-201ENST00000424289 371 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL078601.1-201ENST00000444542 271 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RPS29P20-201ENST00000489592 171 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AC079140.5-201ENST00000507882 310 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AC113155.1-201ENST00000511141 769 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 MIR3162-201ENST00000581818 82 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 MIR4672-201ENST00000583126 81 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 RNU6-85P-201ENST00000605989 107 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 Z69720.2-201ENST00000624755 279 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 MIR1302-1-201ENST00000637932 143 ntBASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNX9Q9Y5X1 AL136360.1-201ENST00000503377 1900 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.11-201ENST00000362375 109 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 RNU6-128P-201ENST00000383976 107 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 RNU6-95P-201ENST00000384697 107 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MIR10A-201ENST00000385043 110 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC007560.1-201ENST00000426912 237 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 FABP5P14-201ENST00000437273 393 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 RPS27AP10-201ENST00000496103 208 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC025423.5-201ENST00000550230 219 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AL391261.3-201ENST00000557194 520 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MIR3670-3-201ENST00000584855 65 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC016727.1-205ENST00000605437 569 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 AC064836.2-201ENST00000609491 462 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 MIR3670-4-201ENST00000612260 65 ntBASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNX9Q9Y5X1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 RNU6-562P-201ENST00000362731 107 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SNORD73A-201ENST00000386062 65 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SNORD56-201ENST00000413522 71 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 RPL26P27-201ENST00000414397 437 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AL353729.1-201ENST00000425044 720 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC092427.1-202ENST00000430569 476 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 UBE2DNL-203ENST00000474922 222 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.675-201ENST00000516389 149 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC069113.1-201ENST00000517763 267 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC007151.1-201ENST00000572774 483 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 MIR4790-201ENST00000577799 79 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 ELOCP5-201ENST00000604924 333 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AL050343.2-201ENST00000607338 280 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AC010378.1-201ENST00000619270 362 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 AL359757.2-201ENST00000624309 274 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 U6.99-201ENST00000637524 83 ntBASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms