Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 MIR606-201ENST00000384851 96 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-750P-201ENST00000390946 107 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-308P-201ENST00000390957 107 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 MCFD2P1-201ENST00000417812 300 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC008267.5-201ENST00000424928 265 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC079354.2-201ENST00000453523 154 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL049830.2-201ENST00000480072 201 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 SNORD116.3-201ENST00000517176 78 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC025281.1-201ENST00000567026 265 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 MIR5701-3-201ENST00000578890 82 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 MIR5701-1-201ENST00000585138 82 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL158827.2-201ENST00000602494 330 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC019159.1-201ENST00000605094 187 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC016925.2-201ENST00000605108 242 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL355802.3-201ENST00000607571 545 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC019176.2-201ENST00000611579 315 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC083806.3-201ENST00000614016 455 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 MIR5701-2-201ENST00000615634 82 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AC084757.4-201ENST00000616350 526 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 AL691447.3-201ENST00000635020 330 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 SNORA71.3-201ENST00000362582 128 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 Y_RNA.48-201ENST00000362710 103 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 SNORD56.1-201ENST00000362913 68 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-748P-201ENST00000384648 107 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AL031659.1-201ENST00000447075 539 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AL031183.1-201ENST00000457667 207 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AP001025.1-201ENST00000486139 332 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 SNORA25.10-201ENST00000515926 124 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-120P-201ENST00000516077 103 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-91P-201ENST00000607774 107 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 AC097372.5-201ENST00000623665 376 ntBASIC3.34□□□□□ -1.87
PCDHA13Q9Y5I0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHA13Q9Y5I0 AC007256.1-201ENST00000392253 2765 ntBASIC3.34□□□□□ -1.88
PCDHA13Q9Y5I0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PCDHA13Q9Y5I0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 Y_RNA.148-201ENST00000363557 117 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 SNORA63C-201ENST00000364578 129 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RNU6-639P-201ENST00000384074 107 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RNY1P14-201ENST00000384426 108 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 Y_RNA.496-201ENST00000384444 101 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 MIR490-201ENST00000384865 128 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 MIR23A-201ENST00000385245 73 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AL138885.1-201ENST00000405921 675 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RPL23AP95-201ENST00000426806 265 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RPL30P10-201ENST00000488148 337 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 SNORD59.2-201ENST00000516873 68 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AL360085.1-201ENST00000604713 532 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AC040896.1-201ENST00000613819 479 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 HMGB1P24-202ENST00000615653 685 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AC008669.1-201ENST00000565823 2178 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
PCDHA13Q9Y5I0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 SNORD32A-201ENST00000364805 84 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 RNU6-622P-201ENST00000384272 103 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA13Q9Y5I0 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms