Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC130509.1-201ENST00000464158 433 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 RPL30P12-201ENST00000474666 353 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC132942.1-201ENST00000486753 483 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC107934.1-201ENST00000522215 217 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC091135.1-201ENST00000585943 307 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AP000654.2-201ENST00000605633 586 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AL139022.2-201ENST00000606934 443 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AL359547.2-201ENST00000615810 418 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC068205.3-201ENST00000636385 468 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC233981.2-201ENST00000611524 1614 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 SNORD56.1-201ENST00000362913 68 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MIR1267-201ENST00000408723 78 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AL031779.1-201ENST00000415663 330 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 RPL22P18-201ENST00000417197 377 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AC006366.1-201ENST00000422002 759 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MTND4P20-201ENST00000424125 869 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AC139712.2-201ENST00000424302 339 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MTND3P1-201ENST00000441336 220 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 HMGN2P18-201ENST00000450680 270 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 RPL26P26-201ENST00000480251 434 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MTND5P9-201ENST00000503854 1755 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 RRN3P3-201ENST00000549207 578 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 LINC02555-201ENST00000563933 1951 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MIR3124-201ENST00000582636 67 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 MIR548AC-201ENST00000585049 88 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AL359821.1-201ENST00000605519 182 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AC107308.1-201ENST00000615897 301 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.02□□□□□ -2.25
HDGFL3Q9Y3E1 AL445523.1-201ENST00000451184 1362 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RNA5SP432-201ENST00000362480 116 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RNU6-414P-201ENST00000363705 104 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RNY4P16-201ENST00000364768 94 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 SNORD1A-201ENST00000364968 72 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RPS3AP36-201ENST00000398190 775 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RPS20P2-201ENST00000402520 389 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AL357139.1-201ENST00000407792 426 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RPS27P16-201ENST00000425758 201 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC007969.2-201ENST00000441891 191 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 MTND2P33-201ENST00000506452 1031 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC108729.3-201ENST00000513484 108 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 MTATP6P15-201ENST00000527233 835 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC011979.2-201ENST00000527568 352 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC012414.6-201ENST00000568241 401 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AP001004.1-201ENST00000582468 324 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC112187.2-201ENST00000604345 283 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AL121890.5-201ENST00000620848 304 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 RMST_7.1-201ENST00000621935 268 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 OR4G3P-201ENST00000633500 913 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC013437.2-201ENST00000639587 677 ntBASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
HDGFL3Q9Y3E1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 RNU4-92P-201ENST00000363783 136 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 SNORD32B-201ENST00000364460 84 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 RPL23AP36-201ENST00000413895 458 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AL589872.1-201ENST00000426602 288 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 C8orf59P1-201ENST00000429930 303 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 MTND1P32-201ENST00000433043 938 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC027119.1-201ENST00000440877 241 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 KATNBL1P3-201ENST00000443475 909 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 RPL39P29-201ENST00000447779 157 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 MTND1P12-201ENST00000455231 147 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AL122001.1-201ENST00000457027 370 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC093852.1-201ENST00000503587 266 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 MTCO3P9-201ENST00000506989 781 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC108078.1-201ENST00000508073 725 ntBASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1□□□□□ -2.25
HDGFL3Q9Y3E1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms