Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 ADI1P3-201ENST00000549509 470 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 DNAJC19P9-201ENST00000555084 351 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AP001004.1-201ENST00000582468 324 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC022022.2-201ENST00000602989 360 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AL353778.1-201ENST00000603149 408 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC131159.1-201ENST00000621854 213 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RNA5SP99-201ENST00000364020 114 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RNU6-371P-201ENST00000364283 108 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RNU6-906P-201ENST00000384700 70 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 EEF1A1P40-201ENST00000412883 573 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 NCOR1P3-201ENST00000420479 303 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC084290.1-201ENST00000434995 374 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RPL37P21-201ENST00000435890 276 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RPL22P17-201ENST00000438729 315 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RPL39P29-201ENST00000447779 157 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 RNU1-123P-201ENST00000458950 160 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC130509.1-201ENST00000464158 433 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC108078.2-201ENST00000510750 236 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 MIR449C-201ENST00000516047 92 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC087441.2-201ENST00000529141 262 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 MIR4509-3-201ENST00000578671 94 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 MIR4509-2-201ENST00000583920 94 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC091135.1-201ENST00000585943 307 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AL136363.2-201ENST00000604173 851 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AL050343.2-201ENST00000607338 280 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 MIR4509-1-201ENST00000618224 94 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.93□□□□□ -2.26
HHLA3Q9XRX5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RNU6-78P-201ENST00000362897 107 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 SNORA7.1-201ENST00000363750 139 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 SNORA62.1-201ENST00000364287 154 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 SNORA17.3-201ENST00000391159 129 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RNU1-78P-201ENST00000391248 165 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RNU4-62P-201ENST00000410125 130 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC007283.2-201ENST00000424739 197 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC108667.1-201ENST00000428618 249 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 MTND5P2-201ENST00000442927 1142 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RPS29P29-201ENST00000456396 171 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 MTCYBP18-201ENST00000501056 747 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RNU5F-2P-201ENST00000516066 82 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 MTND2P7-201ENST00000521337 640 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 RRN3P3-201ENST00000549207 578 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 MIR4421-201ENST00000578133 69 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 SNORA77B-201ENST00000578179 125 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AP001485.1-201ENST00000604799 199 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC104010.1-201ENST00000616889 150 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AL031667.3-201ENST00000620124 655 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC130454.1-201ENST00000622948 401 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AC008993.2-201ENST00000631744 806 ntBASIC0.92□□□□□ -2.26
HHLA3Q9XRX5 AP000560.1-201ENST00000624150 1937 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 MIR378A-201ENST00000362177 66 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 Y_RNA.67-201ENST00000362870 100 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 RNU6-112P-201ENST00000363599 104 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 RNU6-271P-201ENST00000363858 105 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 SNORA24.1-201ENST00000384401 135 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 SNORD115.1-201ENST00000391109 76 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 RPS27AP14-201ENST00000422868 454 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 MTCO1P44-201ENST00000441935 243 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC112492.4-201ENST00000456549 352 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 DUXAP8-207ENST00000456786 622 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC006026.2-201ENST00000457376 180 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 RNU6-333P-201ENST00000459117 107 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 MTND2P33-201ENST00000506452 1031 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 RBBP4P6-201ENST00000508098 202 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC025465.3-201ENST00000510570 311 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms