Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 AC058791.1-201ENST00000608412 3198 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-873P-201ENST00000363833 107 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.217-201ENST00000364214 105 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-449P-201ENST00000383914 107 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-211P-201ENST00000384047 107 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.441-201ENST00000384123 112 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.488-201ENST00000384403 102 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RPL23AP95-201ENST00000426806 265 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AL512844.2-201ENST00000433990 593 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.641-201ENST00000459414 105 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RPS4XP22-201ENST00000480755 780 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC016632.1-201ENST00000503994 196 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 RN7SKP289-201ENST00000517244 295 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC016256.1-201ENST00000547971 354 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC087499.8-201ENST00000578406 226 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AC010999.1-201ENST00000611856 324 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 MAPK10-253ENST00000641010 4072 ntBASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZC3H4Q9UPT8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-137P-201ENST00000363680 108 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-959P-201ENST00000384671 107 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 MIR30B-201ENST00000384850 88 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 U3.19-201ENST00000390893 196 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 MIR921-201ENST00000401133 56 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 MIR1179-201ENST00000408703 91 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-625P-201ENST00000459412 107 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AL049830.2-201ENST00000480072 201 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RN7SL323P-201ENST00000494712 295 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RPL23AP97-201ENST00000568955 471 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AC012531.5-201ENST00000611375 151 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AC092628.2-201ENST00000622492 339 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AC091905.2-201ENST00000623143 306 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AC007546.2-201ENST00000623996 360 ntBASIC5□□□□□ -1.61
ZC3H4Q9UPT8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5□□□□□ -1.61
ZC3H4Q9UPT8 AC092593.1-201ENST00000515413 1815 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.571-201ENST00000384753 98 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 MIR493-201ENST00000385254 89 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-131P-201ENST00000391144 107 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RPS29P4-201ENST00000414733 161 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AC012308.1-201ENST00000451232 178 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 MTATP6P7-201ENST00000453315 681 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RNU1-61P-201ENST00000516107 151 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-479P-201ENST00000516348 105 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 IGLV3-26-201ENST00000520756 302 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AC055872.1-201ENST00000570978 278 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AL356157.2-201ENST00000605122 111 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 AC022441.3-201ENST00000605737 136 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 snoU18.1-201ENST00000629629 71 ntBASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZC3H4Q9UPT8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RNU1-108P-201ENST00000362556 161 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 SNORA40.19-201ENST00000390846 128 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AL358075.3-201ENST00000426289 226 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 BTF3P11-201ENST00000426582 477 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RPS26P28-201ENST00000470806 348 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RPS29P2-201ENST00000479278 136 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms