Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC245102.2-201ENST00000448956 180 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AL353752.1-201ENST00000454946 260 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 BZW1P2-201ENST00000473537 826 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 RPL30P12-201ENST00000474666 353 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 MTND3P25-201ENST00000509243 135 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 MTND1P22-201ENST00000510572 951 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 RNU6-232P-201ENST00000517144 64 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC090572.1-201ENST00000519251 160 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC073539.2-201ENST00000597113 165 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC090578.1-201ENST00000604955 591 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNA5SP432-201ENST00000362480 116 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNA5SP99-201ENST00000364020 114 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNU6-553P-201ENST00000364047 96 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNY4P34-201ENST00000364779 95 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 SNORD115-7-201ENST00000365306 82 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RNA5SP465-201ENST00000391195 109 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 MIR1283-2-201ENST00000408621 87 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 SNORD56-201ENST00000413522 71 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RPL30P1-201ENST00000488676 339 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC104806.1-201ENST00000508720 308 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 RN7SKP287-201ENST00000516546 266 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AP002453.2-201ENST00000533503 320 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC087883.1-201ENST00000551882 391 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 MIR3682-201ENST00000581338 84 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC078795.2-201ENST00000602835 1252 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AL078605.1-201ENST00000603529 500 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AL136363.2-201ENST00000604173 851 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 AC093424.1-201ENST00000604999 338 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 MTND5P17-201ENST00000418405 1603 ntBASIC1.79□□□□□ -2.12
CDH9Q9ULB4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 RNU6-234P-201ENST00000365229 104 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 SNORD14D-201ENST00000384390 87 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 SNORA8-201ENST00000384574 139 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 RNU2-3P-201ENST00000410144 191 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 RNU6-607P-201ENST00000411283 108 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 OR6C66P-201ENST00000414917 930 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC007969.2-201ENST00000441891 191 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 SNORD13-201ENST00000459299 104 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 RNU6-410P-201ENST00000517006 107 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 Y_RNA.717-201ENST00000517106 92 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC091135.1-201ENST00000585943 307 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH9Q9ULB4 Z99289.3-201ENST00000605586 594 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AC122133.1-201ENST00000613964 233 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 AF246928.1-201ENST00000623768 87 ntBASIC1.78□□□□□ -2.12
CDH9Q9ULB4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RNU6-116P-201ENST00000384042 109 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RNU5A-2P-201ENST00000384337 116 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RNA5SP213-201ENST00000391031 106 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 BX510359.4-201ENST00000423750 193 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RPL39P29-201ENST00000447779 157 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RNU6-965P-201ENST00000516721 96 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 RNU6-759P-201ENST00000516740 103 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AP005639.2-201ENST00000527592 928 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AC008250.2-201ENST00000615261 205 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 AL603839.4-201ENST00000624658 1005 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 U6.114-201ENST00000636407 96 ntBASIC1.77□□□□□ -2.13
CDH9Q9ULB4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 Y_RNA.367-201ENST00000365544 101 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 CYCSP33-201ENST00000414485 327 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AL591043.1-201ENST00000432461 424 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 RPS15AP10-201ENST00000432472 382 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 MTND2P33-201ENST00000506452 1031 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms