Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR659-201ENST00000384963 97 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 MIR549A-201ENST00000385268 96 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 SNORD96B-201ENST00000386148 79 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RNU6-750P-201ENST00000390946 107 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AL357139.1-201ENST00000407792 426 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AC009237.10-201ENST00000414112 510 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AIMP1P2-201ENST00000425294 312 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RNU6-1219P-201ENST00000516143 112 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RN7SKP21-201ENST00000516503 220 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RNA5SP309-201ENST00000516670 106 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 MIR3145-201ENST00000580727 82 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 SNORD11B-201ENST00000607707 90 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AC069200.1-201ENST00000609511 323 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AL672167.1-203ENST00000641299 2975 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AC139713.2-215ENST00000641428 5037 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 RNU6-529P-201ENST00000363383 104 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 RNU6-704P-201ENST00000364162 103 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 RNU2-49P-201ENST00000410666 184 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 RPS29P17-201ENST00000430795 166 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 RNU2-12P-201ENST00000517216 168 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AP002001.1-203ENST00000534002 267 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 TGIF1P1-201ENST00000558095 802 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AC009127.3-201ENST00000570531 403 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 MIR3939-201ENST00000582614 106 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 DEFB117-201ENST00000602356 141 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AL391813.1-201ENST00000603098 260 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AC025946.2-201ENST00000603398 234 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 TCL6_2.1-201ENST00000615162 119 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AC005562.2-201ENST00000618264 111 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 AC068724.3-201ENST00000625906 87 ntBASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.01□□□□□ -1.77
FOXD3Q9UJU5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXD3Q9UJU5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.40-201ENST00000362645 93 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 U3.9-201ENST00000363823 204 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 RPL7AP25-201ENST00000423357 805 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AL606753.1-201ENST00000427435 87 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 RPL23AP93-201ENST00000440847 484 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXD3Q9UJU5 MIR3160-1-201ENST00000577972 85 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AC011471.1-201ENST00000585766 187 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AL133393.1-201ENST00000603277 287 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 AL034408.1-202ENST00000636088 415 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 AC007496.3-201ENST00000624987 3443 ntBASIC4□□□□□ -1.77
FOXD3Q9UJU5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4□□□□□ -1.77
FOXD3Q9UJU5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RNU6-804P-201ENST00000384286 107 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 SNORA57.1-201ENST00000391227 145 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RPS26P8-201ENST00000393490 348 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AL133475.1-201ENST00000404414 305 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 BTF3P11-201ENST00000426582 477 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RPS3P1-201ENST00000456781 192 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC091179.1-201ENST00000461606 579 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RN7SL98P-201ENST00000462271 300 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RPL21P126-201ENST00000470049 478 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RN7SL132P-201ENST00000478131 296 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 RN7SL817P-201ENST00000480777 288 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC105137.1-201ENST00000484355 562 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms