Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 GTF2IP13-201ENST00000438487 386 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 Z73417.1-201ENST00000447373 778 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 RNU5A-4P-201ENST00000516588 111 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 RNU6-64P-201ENST00000517119 105 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 MTCO3P15-201ENST00000526563 574 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC069114.2-201ENST00000604699 304 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 BNIP3P10-201ENST00000605360 577 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC105129.3-201ENST00000605455 485 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AL159153.1-201ENST00000619688 317 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC097460.3-201ENST00000623099 442 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 MIR6767-201ENST00000637302 66 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 SNORA63D-201ENST00000364359 132 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 RPS26P5-201ENST00000418544 335 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC108059.3-201ENST00000456388 214 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC034244.1-201ENST00000507687 207 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC009646.1-201ENST00000510455 318 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 RNU6-1053P-201ENST00000515930 101 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 RNA5SP102-201ENST00000516865 106 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 SNORA70.22-201ENST00000517160 124 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC133485.1-201ENST00000567176 124 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC138907.6-201ENST00000568401 126 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 BNIP3P16-201ENST00000589779 534 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AL391001.1-201ENST00000602747 715 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC090578.1-201ENST00000604955 591 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 RMST_4.1-201ENST00000616886 107 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 AL512643.1-201ENST00000635735 524 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 MTND4P21-201ENST00000453886 1357 ntBASIC0.43□□□□□ -2.34
COMMD3Q9UBI1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 MIR337-201ENST00000362281 93 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 snoU2_19.1-201ENST00000362361 80 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RNU6-212P-201ENST00000362642 104 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RNU6-17P-201ENST00000384245 107 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RNU6-18P-201ENST00000384527 107 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RNU6-1025P-201ENST00000410629 104 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 MTCO2P25-201ENST00000447065 681 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 SNORD124-201ENST00000459577 104 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RPS27P22-201ENST00000478056 241 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 RNA5SP490-201ENST00000517141 136 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC091163.3-201ENST00000518269 1144 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC021451.1-201ENST00000523498 1129 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 DEFB131D-201ENST00000526803 184 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 HSPE1P4-201ENST00000550617 308 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AL157871.3-201ENST00000557231 293 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC090186.1-201ENST00000605991 572 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 PCMTD1P7-201ENST00000634506 357 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC010615.1-201ENST00000594254 1764 ntBASIC0.42□□□□□ -2.34
COMMD3Q9UBI1 AC023934.1-201ENST00000574529 2389 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 MIR340-201ENST00000362125 95 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6-354P-201ENST00000383862 107 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6-610P-201ENST00000384264 107 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6-1176P-201ENST00000390955 107 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU2-7P-201ENST00000410794 178 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC083875.1-201ENST00000419509 405 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 LARP1BP3-201ENST00000437229 869 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 NEFMP1-201ENST00000443423 1006 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 FTH1P25-201ENST00000447665 469 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 MTND2P30-201ENST00000456663 382 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6-953P-201ENST00000459154 107 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 RNU6-237P-201ENST00000515985 71 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 SUMO2P18-201ENST00000518873 252 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC090142.3-201ENST00000519012 385 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 MTND1P36-201ENST00000522384 936 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC011604.1-201ENST00000545978 196 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC092325.1-201ENST00000566449 554 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC025678.1-201ENST00000567861 338 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC107304.1-201ENST00000604229 296 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 AC231657.1-201ENST00000624313 397 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 MTND5P33-201ENST00000571250 1450 ntBASIC0.41□□□□□ -2.34
COMMD3Q9UBI1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.4□□□□□ -2.35
COMMD3Q9UBI1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
COMMD3Q9UBI1 RNU6-207P-201ENST00000384137 107 ntBASIC0.4□□□□□ -2.35
COMMD3Q9UBI1 RNU6-72P-201ENST00000384285 79 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms