Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 PLCE1P1-201ENST00000622094 305 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-942P-201ENST00000363002 107 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RPS29P13-201ENST00000402041 169 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 MTND2P23-201ENST00000422990 651 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 USMG5P1-201ENST00000425964 177 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 Z82205.1-201ENST00000428456 297 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AL591043.1-201ENST00000432461 424 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC012308.1-201ENST00000451232 178 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 MTCO3P10-201ENST00000455912 772 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RPL7P42-201ENST00000481005 679 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RNA5SP356-201ENST00000515972 94 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC022634.1-201ENST00000520765 532 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC109446.1-201ENST00000566172 220 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC005899.2-201ENST00000584353 90 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AL360085.1-201ENST00000604713 532 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC005046.1-201ENST00000608515 625 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DNMT3BQ9UBC3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-105P-201ENST00000363909 104 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 SNORD116-20-201ENST00000384529 92 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 FTH1P15-201ENST00000406984 280 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 MTCYBP6-201ENST00000441810 138 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AL135938.1-201ENST00000443141 297 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 FTH1P25-201ENST00000447665 469 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 MRPL42P6-201ENST00000486397 371 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-612P-201ENST00000516909 102 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AP005902.1-201ENST00000521358 186 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 CR383656.8-201ENST00000549046 145 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 MIR3976-201ENST00000606807 139 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AC138627.2-201ENST00000624202 601 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
DNMT3BQ9UBC3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 MIR521-1-201ENST00000384902 87 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AL590004.1-201ENST00000405321 300 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AL161651.1-201ENST00000440882 223 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC117440.1-201ENST00000474107 571 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 SNORD19.2-201ENST00000516978 73 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 MIR4273-201ENST00000582824 84 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 BNIP3P16-201ENST00000589779 534 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AL080274.1-201ENST00000605565 220 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 MIR8076-201ENST00000611401 83 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC134503.1-201ENST00000633048 54 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
DNMT3BQ9UBC3 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 MIR369-201ENST00000362155 70 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms