Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP35Q9P2H5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP35Q9P2H5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 RNU6-1252P-201ENST00000363054 104 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 Y_RNA.160-201ENST00000363677 92 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 RNU6-1222P-201ENST00000384615 107 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 RNU2-52P-201ENST00000410680 190 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 CYCSP48-201ENST00000417124 323 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 RPL21P111-201ENST00000418453 477 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 AC104332.2-201ENST00000429959 156 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AC243964.1-201ENST00000441814 261 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 snoU13.14-201ENST00000459372 104 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AC117440.1-201ENST00000474107 571 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 RPL23AP70-201ENST00000483361 460 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 SCOCP1-201ENST00000554676 349 ntBASIC4.03□□□□□ -1.76
USP35Q9P2H5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.03□□□□□ -1.76
USP35Q9P2H5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP35Q9P2H5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 MTND4P27-201ENST00000450813 1354 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP35Q9P2H5 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP35Q9P2H5 SNORA32.2-201ENST00000384049 122 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 RNU1-57P-201ENST00000384491 166 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC092427.1-202ENST00000430569 476 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 SNAP23P1-201ENST00000433229 246 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 RNU6-329P-201ENST00000459618 107 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 RPS26P21-201ENST00000475397 348 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC096745.1-201ENST00000509945 370 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC025465.4-201ENST00000513422 638 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 SMURF2P1-201ENST00000514992 481 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 AC073410.2-201ENST00000603240 332 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 AL356280.1-201ENST00000603614 379 ntBASIC4.02□□□□□ -1.77
USP35Q9P2H5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USP35Q9P2H5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC245054.2-201ENST00000415639 319 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AL513124.1-201ENST00000450410 614 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC083906.5-201ENST00000503722 328 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 RNU4-49P-201ENST00000516080 140 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 SNORA20.3-201ENST00000516880 132 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC104576.1-201ENST00000524225 88 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 TRAV32-201ENST00000553993 340 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC027176.1-201ENST00000560204 514 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 MIR3199-1-201ENST00000582434 88 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 MIR3942-201ENST00000585264 109 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC069294.1-201ENST00000608397 350 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 uc_338.15-201ENST00000615470 191 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC097372.5-201ENST00000623665 376 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 AC091903.1-201ENST00000624322 454 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.01□□□□□ -1.77
USP35Q9P2H5 MTND4P23-201ENST00000447723 1363 ntBASIC4.01□□□□□ -1.77
USP35Q9P2H5 RNU6-562P-201ENST00000362731 107 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 RNU6-1180P-201ENST00000364935 107 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 SNORD116-11-201ENST00000383882 92 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 RNU6-767P-201ENST00000384132 107 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP35Q9P2H5 FO393413.1-201ENST00000402892 195 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 MTND3P8-201ENST00000412909 339 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC138393.2-201ENST00000414742 246 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 RPL30P4-201ENST00000429309 333 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 RPS12P18-201ENST00000442381 270 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 LAMTOR5P1-201ENST00000444290 270 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 UBBP3-201ENST00000445497 241 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 Y_RNA.638-201ENST00000459374 113 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 U8.21-201ENST00000459536 136 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4□□□□□ -1.77
USP35Q9P2H5 MTCO1P29-201ENST00000496868 288 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC023141.11-201ENST00000508864 202 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC008526.1-201ENST00000509149 338 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 RN7SKP43-201ENST00000516173 320 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC079600.2-201ENST00000550076 130 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC105245.1-201ENST00000581934 244 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AL159153.1-201ENST00000619688 317 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 AC241585.2-209ENST00000638217 143 ntBASIC4□□□□□ -1.77
USP35Q9P2H5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
USP35Q9P2H5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP35Q9P2H5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 AL355596.1-201ENST00000565399 3996 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 CBX3P1-201ENST00000325243 554 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 RNU6-529P-201ENST00000363383 104 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 Y_RNA.166-201ENST00000363730 102 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 MIR196B-201ENST00000384852 84 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AL360182.1-201ENST00000397433 468 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 RNU2-25P-201ENST00000411041 191 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms