Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC123912.5-201ENST00000605470 343 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC097372.5-201ENST00000623665 376 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC006927.4-201ENST00000639187 543 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 RNU6-527P-201ENST00000363425 104 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 RNU6-371P-201ENST00000364283 108 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 RNU5E-7P-201ENST00000365290 117 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 MTND2P4-201ENST00000445034 1004 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 HMGN2P18-201ENST00000450680 270 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC132942.1-201ENST00000486753 483 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 MTND2P7-201ENST00000521337 640 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AP003181.2-201ENST00000528941 181 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AP003034.1-201ENST00000534621 422 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 TRAV32-201ENST00000553993 340 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC005786.1-201ENST00000588553 154 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC013412.1-201ENST00000610687 192 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.24□□□□□ -2.21
VAPAQ9P0L0 AC131159.1-201ENST00000621854 213 ntBASIC1.24□□□□□ -2.21
VAPAQ9P0L0 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU6-414P-201ENST00000363705 104 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU6-271P-201ENST00000363858 105 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU6-641P-201ENST00000384006 107 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 MIR23A-201ENST00000385245 73 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 SNORA12-201ENST00000391162 147 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU2-39P-201ENST00000410604 198 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 EEF1A1P40-201ENST00000412883 573 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AL121601.2-201ENST00000438019 707 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AL009048.1-201ENST00000450437 298 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 RNU6-333P-201ENST00000459117 107 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AC117522.1-201ENST00000509821 380 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AC090888.2-201ENST00000559765 1144 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 MIR5094-201ENST00000578766 85 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 MIR5692A1-201ENST00000580523 69 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 AC105129.3-201ENST00000605455 485 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 MIR7843-201ENST00000622274 79 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VAPAQ9P0L0 LINC02555-201ENST00000563933 1951 ntBASIC1.23□□□□□ -2.21
VAPAQ9P0L0 MTND4P9-201ENST00000507819 1346 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
VAPAQ9P0L0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.22□□□□□ -2.21
VAPAQ9P0L0 RNU6-112P-201ENST00000363599 104 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 RNU4-1-201ENST00000363925 141 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VAPAQ9P0L0 SNORD115.1-201ENST00000391109 76 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 MTCYBP36-201ENST00000404146 440 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 MIR1267-201ENST00000408723 78 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 CALM2P2-201ENST00000428512 440 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 CR769776.1-201ENST00000441254 787 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 MTCO1P44-201ENST00000441935 243 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 ART2BP-201ENST00000453501 499 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC087477.1-201ENST00000465747 340 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AP000873.5-201ENST00000533906 236 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 MTND4P33-201ENST00000556706 766 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC103987.3-201ENST00000582071 292 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC008521.1-201ENST00000587471 187 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC104073.3-201ENST00000610942 955 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AC022513.1-201ENST00000624512 117 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 AP000720.1-201ENST00000625091 483 ntBASIC1.22□□□□□ -2.21
VAPAQ9P0L0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VAPAQ9P0L0 RNU6-1222P-201ENST00000384615 107 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MIR620-201ENST00000385232 95 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 SNORA67.5-201ENST00000391036 107 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MRPL42P2-201ENST00000403169 426 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 RPL21P111-201ENST00000418453 477 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 ELOCP4-201ENST00000420090 333 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AL669831.1-202ENST00000428504 417 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 RPS24P1-201ENST00000438550 371 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MTCO2P29-201ENST00000465212 189 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC145146.1-201ENST00000496370 254 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 UBE2V1P12-201ENST00000503954 474 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 HMGN1P13-201ENST00000505795 138 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms