Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXD4L1Q9NU39 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
FOXD4L1Q9NU39 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXD4L1Q9NU39 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXD4L1Q9NU39 AC083843.2-201ENST00000568248 6253 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 RNU6-690P-201ENST00000365242 106 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 MIR520G-201ENST00000385064 90 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 RPL19P16-201ENST00000433839 588 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 RNU6-830P-201ENST00000516353 107 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AP001880.2-201ENST00000538233 448 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 MIR4660-201ENST00000583549 74 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXD4L1Q9NU39 AC092376.2-201ENST00000622621 4116 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 Z98742.2-201ENST00000431564 187 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 RPS17P15-201ENST00000475609 349 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 RNU2-34P-201ENST00000516534 121 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 RN7SKP282-201ENST00000516824 299 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 AC063976.2-201ENST00000425667 3556 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 AP001273.1-201ENST00000624493 3152 ntBASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
FOXD4L1Q9NU39 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 Y_RNA.265-201ENST00000364677 108 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 RN7SKP153-201ENST00000365026 316 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 HMGN1P7-201ENST00000491722 313 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 Y_RNA.666-201ENST00000516187 112 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 RNA5SP230-201ENST00000517039 122 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 AC068657.1-201ENST00000520807 306 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 MIR4271-201ENST00000582451 67 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 MIR5197-201ENST00000583721 112 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 AC244107.2-201ENST00000611773 76 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 MIR6778-201ENST00000617912 73 ntBASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
FOXD4L1Q9NU39 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 SNRPGP13-201ENST00000442212 177 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 AC025458.1-201ENST00000506046 166 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 AC092490.3-201ENST00000545370 572 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 AP005431.1-201ENST00000618479 319 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 BX005214.3-202ENST00000619809 325 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 AL031595.2-201ENST00000624215 19071 ntBASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
FOXD4L1Q9NU39 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 RNY1P10-201ENST00000363268 113 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 RN7SKP267-201ENST00000410381 285 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 SNRPGP10-201ENST00000432323 225 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 HLA-DPA3-207ENST00000454398 229 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 AL133162.1-201ENST00000463228 453 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 PPBPP1-201ENST00000510807 373 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 RN7SL544P-201ENST00000617232 284 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 MIR6861-201ENST00000618657 64 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 RN7SL763P-201ENST00000620922 284 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 AP001052.1-201ENST00000626421 99 ntBASIC6.4□□□□□ -1.38
FOXD4L1Q9NU39 INTS6P1-201ENST00000504674 2530 ntBASIC6.4□□□□□ -1.39
FOXD4L1Q9NU39 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.4□□□□□ -1.39
FOXD4L1Q9NU39 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 603.3 ms