Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC018868.1-201ENST00000491307 315 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RNU6-377P-201ENST00000515965 102 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 SNORA40.12-201ENST00000516329 111 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RNU7-193P-201ENST00000516723 65 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AP001893.2-201ENST00000526949 202 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AP003034.1-201ENST00000534621 422 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AC025165.5-201ENST00000602802 578 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AC091805.2-201ENST00000603848 235 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 U2.17-201ENST00000611454 95 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AL354950.2-201ENST00000617939 290 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 RPL23AP83-201ENST00000434984 473 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC013470.1-201ENST00000453438 462 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC079804.2-201ENST00000490376 200 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 RN7SKP256-201ENST00000517201 314 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC069113.1-201ENST00000517763 267 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC034114.1-201ENST00000520293 285 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 COPS8P3-201ENST00000526024 482 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 MIR3126-201ENST00000577443 74 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 MIR3935-201ENST00000583472 104 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 APOOP1-201ENST00000604695 592 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AP001330.5-201ENST00000607176 411 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 Z82243.1-201ENST00000609432 473 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AL161423.1-201ENST00000613700 262 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 uc_338.34-201ENST00000617467 174 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 MIR6873-201ENST00000622788 63 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC139792.3-201ENST00000623525 224 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 AC012640.5-201ENST00000623897 319 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 MTND5P26-201ENST00000426018 1752 ntBASIC1.67□□□□□ -2.14
CCL28Q9NRJ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RNU6-336P-201ENST00000364891 107 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MIR544A-201ENST00000384855 91 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MIR29B2-201ENST00000385055 81 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AL606923.1-201ENST00000406616 190 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 SNORD23.1-201ENST00000408212 104 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RNU2-66P-201ENST00000410650 161 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RNU4-53P-201ENST00000410828 140 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AL139156.1-201ENST00000412785 841 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 EDDM3CP-201ENST00000415977 425 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AL117339.3-201ENST00000418733 162 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MORF4L1P6-201ENST00000418771 268 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AL606489.2-201ENST00000433886 234 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MTATP6P26-201ENST00000445926 662 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RPL30P1-201ENST00000488676 339 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 SNORA4.4-201ENST00000515921 135 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MTND4P7-201ENST00000523876 130 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AP003392.2-201ENST00000527269 208 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 MIR3162-201ENST00000581818 82 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 AC017083.3-201ENST00000609955 700 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 Z99129.1-201ENST00000612510 255 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 DUXAP9-208ENST00000622815 614 ntBASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CCL28Q9NRJ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.65□□□□□ -2.14
CCL28Q9NRJ3 RNU6-428P-201ENST00000362942 107 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 RNU2-16P-201ENST00000410712 136 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 USP9YP18-201ENST00000425912 695 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AC010975.2-201ENST00000427781 588 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 VN1R108P-201ENST00000431580 830 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AC243964.1-201ENST00000441814 261 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 FDX1P2-201ENST00000450769 375 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AL353752.1-201ENST00000454946 260 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AL122001.1-201ENST00000457027 370 ntBASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.65□□□□□ -2.15
CCL28Q9NRJ3 MTND2P33-201ENST00000506452 1031 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms