Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 U2.12-201ENST00000613778 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.20-201ENST00000613956 192 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.9-201ENST00000615427 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.11-201ENST00000616345 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.2-201ENST00000616535 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.3-201ENST00000617785 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.19-201ENST00000618602 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 RNU2-1-201ENST00000618664 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.6-201ENST00000619225 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.5-201ENST00000619465 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 MIR5739-201ENST00000619803 80 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 AC136475.10-201ENST00000620253 385 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 U2.10-201ENST00000620268 191 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 AC139792.2-201ENST00000624218 587 ntBASIC2.2□□□□□ -2.06
HPS4Q9NQG7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 Y_RNA.41-201ENST00000362646 102 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RNU6-487P-201ENST00000365430 104 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 SNORA51.11-201ENST00000384442 131 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 Y_RNA.582-201ENST00000391023 95 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RAP1BP3-201ENST00000407180 549 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RNU2-63P-201ENST00000410792 194 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 CYCSP33-201ENST00000414485 327 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL451074.3-201ENST00000437709 472 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC006512.1-201ENST00000468816 291 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AP001025.1-201ENST00000486139 332 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RPL38P4-201ENST00000502376 214 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC091435.1-201ENST00000505442 584 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC074344.1-201ENST00000512823 224 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 Y_RNA.655-201ENST00000515919 96 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RNU6-1178P-201ENST00000516674 107 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 SNORA31.23-201ENST00000517219 133 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC022880.1-201ENST00000534017 973 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC078795.2-201ENST00000602835 1252 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AL096840.1-201ENST00000603287 93 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC025449.1-201ENST00000603896 529 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC026585.1-201ENST00000619582 524 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 RMST_7.1-201ENST00000621935 268 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 AC091932.3-201ENST00000624223 323 ntBASIC2.19□□□□□ -2.06
HPS4Q9NQG7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS4Q9NQG7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 MTND5P26-201ENST00000426018 1752 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU6-623P-201ENST00000363143 105 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU6-715P-201ENST00000365204 103 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU6-622P-201ENST00000384272 103 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 U8.13-201ENST00000390842 128 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU2-9P-201ENST00000410194 145 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 MTCO3P41-201ENST00000414801 328 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC074117.2-201ENST00000417130 397 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AIMP1P2-201ENST00000425294 312 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL669831.1-202ENST00000428504 417 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL365400.1-201ENST00000431854 640 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 HMGB1P31-201ENST00000437242 427 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 GTF2IP13-201ENST00000438487 386 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC117503.1-201ENST00000472241 394 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC091133.4-201ENST00000511142 308 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC118273.2-201ENST00000532092 465 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 PSMA3P-201ENST00000555485 635 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 MIR4703-201ENST00000577728 79 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS4Q9NQG7 AL713866.2-201ENST00000603579 219 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 uc_338.11-201ENST00000619132 160 ntBASIC2.18□□□□□ -2.06
HPS4Q9NQG7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HPS4Q9NQG7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms