Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC020895.1-201ENST00000595362 272 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 AP001836.1-201ENST00000604675 523 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC019159.1-201ENST00000605094 187 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC099778.2-201ENST00000610904 211 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC011890.2-201ENST00000613393 294 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 MIR6852-201ENST00000621699 66 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTA1Q9NP79 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VTA1Q9NP79 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
VTA1Q9NP79 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VTA1Q9NP79 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VTA1Q9NP79 Y_RNA.202-201ENST00000364083 110 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNA5SP139-201ENST00000364340 117 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNU6-890P-201ENST00000384121 107 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNU6-784P-201ENST00000384330 106 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.56□□□□□ -1.84
VTA1Q9NP79 AL031183.1-201ENST00000457667 207 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC107626.1-201ENST00000471084 183 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC090096.1-201ENST00000489168 390 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNU6-470P-201ENST00000515954 104 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 RNU6-1153P-201ENST00000516760 105 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC016256.1-201ENST00000547971 354 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.56□□□□□ -1.84
VTA1Q9NP79 AC091152.3-201ENST00000604227 325 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 MAPK10-322ENST00000641485 4530 ntBASIC3.56□□□□□ -1.84
VTA1Q9NP79 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC010889.1-201ENST00000566193 2666 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC117470.1-201ENST00000381974 330 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 Y_RNA.445-201ENST00000384168 102 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 SNORA54-201ENST00000384281 123 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 SNORD15B-201ENST00000384714 146 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 RN7SKP220-201ENST00000410611 288 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 EIF1AXP1-201ENST00000419267 435 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 RPL23AP50-201ENST00000434149 455 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 RPS29P27-201ENST00000463711 170 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 MIR2276-201ENST00000516886 89 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 SUB1P3-201ENST00000564581 315 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 MTCO3P13-201ENST00000577757 781 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 MIR5696-201ENST00000578474 85 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 SNRPGP17-201ENST00000603780 214 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 MIR3976-201ENST00000606807 139 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC096772.1-201ENST00000609146 564 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 AC099654.10-201ENST00000640395 161 ntBASIC3.55□□□□□ -1.84
VTA1Q9NP79 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VTA1Q9NP79 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VTA1Q9NP79 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VTA1Q9NP79 SNORA71.1-201ENST00000364523 117 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 Y_RNA.500-201ENST00000384466 111 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC007969.2-201ENST00000441891 191 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC068781.1-201ENST00000488231 618 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 RNU6-1213P-201ENST00000517075 94 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 SNORA31.23-201ENST00000517219 133 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 DNAJC8P1-201ENST00000554535 372 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC020661.2-201ENST00000560114 134 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 MIR4513-201ENST00000581077 86 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AL391813.1-201ENST00000603098 260 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AL033523.1-201ENST00000605153 153 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 MIR7106-201ENST00000612419 65 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 uc_338.22-201ENST00000622722 187 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC138627.2-201ENST00000624202 601 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC092608.2-201ENST00000624427 218 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VTA1Q9NP79 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
VTA1Q9NP79 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTA1Q9NP79 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VTA1Q9NP79 ZNF299P-201ENST00000406845 1804 ntBASIC3.54□□□□□ -1.84
VTA1Q9NP79 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 MTND5P9-201ENST00000503854 1755 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 MIR369-201ENST00000362155 70 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 SNORD56.1-201ENST00000362913 68 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 Y_RNA.138-201ENST00000363462 102 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 RNU6-799P-201ENST00000363567 107 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 Y_RNA.252-201ENST00000364556 101 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 Y_RNA.326-201ENST00000365176 113 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms