Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AL358075.3-201ENST00000426289 226 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AL512844.2-201ENST00000433990 593 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 SNRPEP9-201ENST00000436794 238 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 RN7SL385P-201ENST00000468873 276 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC020593.1-201ENST00000507399 299 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GCM1Q9NP62 SNORA31.8-201ENST00000516327 108 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 RNU6-919P-201ENST00000516731 104 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 RNA5SP468-201ENST00000516782 93 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 TOMM20P2-201ENST00000540082 421 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 TRAV28-201ENST00000557548 323 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC053481.4-201ENST00000583164 216 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AL359881.1-201ENST00000602916 267 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 AC025946.2-201ENST00000603398 234 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 uc_338.32-201ENST00000615087 172 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 MIR6810-201ENST00000622701 70 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 SNORA43.4-201ENST00000629559 138 ntBASIC3.59□□□□□ -1.83
GCM1Q9NP62 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
GCM1Q9NP62 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
GCM1Q9NP62 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
GCM1Q9NP62 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
GCM1Q9NP62 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
GCM1Q9NP62 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
GCM1Q9NP62 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC010332.2-201ENST00000613083 1904 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC110491.1-201ENST00000562191 2010 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 Y_RNA.182-201ENST00000363880 111 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 Y_RNA.261-201ENST00000364631 102 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 RNU4-17P-201ENST00000365598 141 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC068538.1-201ENST00000376856 336 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 SNORA40-201ENST00000388090 126 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AL357075.1-201ENST00000404107 726 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC114982.1-201ENST00000469402 321 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 RPS29P19-201ENST00000479709 171 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 SNORA31.9-201ENST00000516429 84 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 IGLV3-26-201ENST00000520756 302 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 IGKV2D-19-201ENST00000523346 262 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AP003730.1-201ENST00000524605 285 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 CYCSP29-201ENST00000533731 318 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 LINC00933-203ENST00000559812 219 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC233702.2-202ENST00000562547 291 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 CYCSP39-201ENST00000565821 309 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 MIR548X2-201ENST00000579776 100 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 MIR8059-201ENST00000620427 81 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.58□□□□□ -1.84
GCM1Q9NP62 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.58□□□□□ -1.84
GCM1Q9NP62 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GCM1Q9NP62 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNU6-1272P-201ENST00000362776 107 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNU6-942P-201ENST00000363002 107 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNU5F-3P-201ENST00000363767 117 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 U3.19-201ENST00000390893 196 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNU6-239P-201ENST00000390990 99 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNU6-1248P-201ENST00000391096 64 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GCM1Q9NP62 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 MIR1179-201ENST00000408703 91 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 BTF3P11-201ENST00000426582 477 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 AC010095.1-201ENST00000443543 144 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AL451050.1-201ENST00000450126 415 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNA5SP272-201ENST00000516095 111 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 RNA5SP154-201ENST00000516193 111 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 CYCSP23-201ENST00000519781 313 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 PARP1P2-201ENST00000556806 195 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 MIR5571-201ENST00000577998 113 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 AL008718.3-201ENST00000610217 321 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AC015813.4-201ENST00000610469 179 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AC010999.1-201ENST00000611856 324 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 AL357075.2-201ENST00000614906 189 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GCM1Q9NP62 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 MIR7154-201ENST00000620673 73 ntBASIC3.57□□□□□ -1.84
GCM1Q9NP62 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
GCM1Q9NP62 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms