Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 OR4G3P-201ENST00000633500 913 ntBASIC1.18□□□□□ -2.22
ALX4Q9H161 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
ALX4Q9H161 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AL391994.1-201ENST00000254724 282 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ALX4Q9H161 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ALX4Q9H161 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 SNORD56.1-201ENST00000362913 68 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 RNU6-743P-201ENST00000364151 106 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 MIR578-201ENST00000384828 96 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 SNORA48.1-201ENST00000390879 135 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 RAP1BP3-201ENST00000407180 549 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 Y_RNA.597-201ENST00000410463 100 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AL031779.1-201ENST00000415663 330 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.17□□□□□ -2.22
ALX4Q9H161 MTCO2P23-201ENST00000425216 680 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 RPS15AP10-201ENST00000432472 382 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AL163540.1-201ENST00000485382 386 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AC108078.2-201ENST00000510750 236 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
ALX4Q9H161 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.17□□□□□ -2.22
ALX4Q9H161 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AC137800.2-201ENST00000574375 120 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AC103987.3-201ENST00000582071 292 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 MIR4999-201ENST00000585029 91 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.17□□□□□ -2.22
ALX4Q9H161 AC010608.3-201ENST00000625048 527 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 ZNF680P1-201ENST00000436625 1469 ntBASIC1.17□□□□□ -2.22
ALX4Q9H161 RNU6-533P-201ENST00000384144 107 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC114491.1-201ENST00000416095 246 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC119618.1-201ENST00000434191 222 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.16□□□□□ -2.22
ALX4Q9H161 RPL30P12-201ENST00000474666 353 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AC091489.2-201ENST00000566263 604 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AP000811.1-201ENST00000603803 651 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AL136363.2-201ENST00000604173 851 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AL359999.1-201ENST00000604513 294 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AC018714.1-201ENST00000605028 208 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 AC092106.3-201ENST00000611308 722 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 RMST_7.1-201ENST00000621935 268 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 MIR1248-201ENST00000629190 106 ntBASIC1.16□□□□□ -2.22
ALX4Q9H161 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
ALX4Q9H161 AC233981.2-201ENST00000611524 1614 ntBASIC1.15□□□□□ -2.22
ALX4Q9H161 Y_RNA.67-201ENST00000362870 100 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 RNA5SP100-201ENST00000410903 110 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 RNA5SP59-201ENST00000410922 110 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL590556.1-201ENST00000423231 483 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 CR769776.1-201ENST00000441254 787 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 SNRPGP13-201ENST00000442212 177 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL035666.1-201ENST00000446195 348 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AL360271.2-201ENST00000447710 161 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AC112492.4-201ENST00000456549 352 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AC010587.1-201ENST00000505809 469 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 MTND2P33-201ENST00000506452 1031 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.15□□□□□ -2.23
ALX4Q9H161 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 SNORA31.24-201ENST00000517232 57 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.15□□□□□ -2.23
ALX4Q9H161 AC091135.1-201ENST00000585943 307 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 MTCO2P2-201ENST00000591258 225 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 BNIP3P8-201ENST00000597863 560 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL031775.1-201ENST00000607014 887 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 RNU6-87P-201ENST00000607561 108 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.15□□□□□ -2.23
ALX4Q9H161 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AC063943.3-201ENST00000615562 356 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AC026585.1-201ENST00000619582 524 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.15□□□□□ -2.23
ALX4Q9H161 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.15□□□□□ -2.23
ALX4Q9H161 RNU6-23P-201ENST00000363283 107 ntBASIC1.14□□□□□ -2.23
ALX4Q9H161 RNU4-1-201ENST00000363925 141 ntBASIC1.14□□□□□ -2.23
ALX4Q9H161 RNU6-371P-201ENST00000364283 108 ntBASIC1.14□□□□□ -2.23
ALX4Q9H161 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.14□□□□□ -2.23
ALX4Q9H161 RNU6-39P-201ENST00000384344 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms