| KRTAP9-3 | Q9BYQ3 | SNORD115-6-201 | ENST00000363942 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-42-201 | ENST00000364273 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-15-201 | ENST00000364809 | 81 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-26-201 | ENST00000365067 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-10-201 | ENST00000365073 | 81 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-234P-201 | ENST00000365229 | 104 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-43-201 | ENST00000365503 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD115-36-201 | ENST00000365629 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-811P-201 | ENST00000384069 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | Y_RNA.448-201 | ENST00000384185 | 108 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-1181P-201 | ENST00000384191 | 106 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | IGLJ6-201 | ENST00000390328 | 70 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR942-201 | ENST00000401111 | 86 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | HSPE1P26-201 | ENST00000405341 | 275 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC015818.7-201 | ENST00000428754 | 109 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | GOT2P5-201 | ENST00000433995 | 546 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC006037.1-201 | ENST00000437967 | 287 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RPS29P10-201 | ENST00000439197 | 166 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ATP6V0E1P2-201 | ENST00000441771 | 245 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AL691482.2-201 | ENST00000457453 | 84 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU7-45P-201 | ENST00000459460 | 63 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RN7SL188P-201 | ENST00000469842 | 285 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC093815.1-201 | ENST00000508637 | 280 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC091912.1-201 | ENST00000511351 | 248 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RN7SKP18-201 | ENST00000516005 | 275 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR449C-201 | ENST00000516047 | 92 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ASB8-204 | ENST00000536071 | 568 nt | TSL 4 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR3667-201 | ENST00000581025 | 74 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SLC1A3-215 | ENST00000612708 | 3832 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SCIN-201 | ENST00000297029 | 9713 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | DSC1-202 | ENST00000257198 | 4225 nt | APPRIS P4 TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SCRG1-201 | ENST00000296506 | 4420 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | HCG18-237 | ENST00000444126 | 4605 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SPTA1-201 | ENST00000368147 | 7999 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | PRKDC-201 | ENST00000314191 | 13509 nt | APPRIS P4 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | HDAC9-203 | ENST00000406072 | 4102 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | FAM111B-202 | ENST00000411426 | 3344 nt | TSL 4 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | GAS1RR-201 | ENST00000415801 | 4387 nt | TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | CNTN5-204 | ENST00000524871 | 6258 nt | APPRIS P4 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | OR3A3-203 | ENST00000641141 | 3800 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | DICER1-201 | ENST00000343455 | 10277 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | NAV3-202 | ENST00000536525 | 7386 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF615-213 | ENST00000602063 | 4094 nt | APPRIS P3 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | TCF4-278 | ENST00000636400 | 8343 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | TEK-202 | ENST00000406359 | 3935 nt | TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | OGT-201 | ENST00000373701 | 3310 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MAGI2-205 | ENST00000519748 | 3316 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZEB2-244 | ENST00000638007 | 9140 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RAPGEF4-215 | ENST00000540783 | 3974 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AL049781.1-201 | ENST00000623195 | 3585 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | OTUD4-202 | ENST00000454497 | 7069 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MS4A1-202 | ENST00000389939 | 3372 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | UPF2-203 | ENST00000397053 | 5369 nt | APPRIS P1 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZRANB3-210 | ENST00000536680 | 6943 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF766-201 | ENST00000439461 | 6298 nt | APPRIS P2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC104662.3-202 | ENST00000507794 | 4055 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | PDE5A-203 | ENST00000394439 | 6770 nt | APPRIS ALT2 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | IARS-213 | ENST00000627121 | 4587 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SORBS1-205 | ENST00000371227 | 7279 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | GPATCH2L-201 | ENST00000261530 | 14007 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MEF2C-201 | ENST00000340208 | 6192 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | KIAA0232-202 | ENST00000425103 | 7771 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZYG11B-201 | ENST00000294353 | 8093 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RPTN-201 | ENST00000316073 | 3569 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | FHIT-201 | ENST00000341848 | 174 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | SNORD68-201 | ENST00000363214 | 84 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-335P-201 | ENST00000364563 | 113 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR147B-201 | ENST00000390185 | 80 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC008171.1-201 | ENST00000395058 | 200 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC234781.5-202 | ENST00000453508 | 426 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | TRBV2-201 | ENST00000455382 | 421 nt | APPRIS P1 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | snoU13.24-201 | ENST00000458998 | 104 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-881P-201 | ENST00000516813 | 102 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RNU6-826P-201 | ENST00000516827 | 104 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC104027.1-201 | ENST00000521887 | 300 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | YWHAEP2-201 | ENST00000580066 | 112 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RN7SL690P-201 | ENST00000582087 | 240 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | YWHAEP3-201 | ENST00000582767 | 121 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC244107.2-201 | ENST00000611773 | 76 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR8066-201 | ENST00000617280 | 78 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | FTO-223 | ENST00000640179 | 210 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | RBMXL1-201 | ENST00000321792 | 4799 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MYBPC1-203 | ENST00000392934 | 3644 nt | APPRIS ALT2 TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | C1orf132-203 | ENST00000608023 | 15145 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MAML2-202 | ENST00000618849 | 3154 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AP1G1-201 | ENST00000299980 | 6969 nt | APPRIS P3 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | ZNF107-205 | ENST00000613690 | 5589 nt | APPRIS ALT2 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC114316.2-202 | ENST00000502934 | 2957 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | PSMB2-202 | ENST00000621781 | 4217 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | AC068254.2-201 | ENST00000623938 | 3577 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | MFAP3L-203 | ENST00000393704 | 5827 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | DIS3-201 | ENST00000377767 | 10604 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| KRTAP9-3 | Q9BYQ3 | PIK3CB-201 | ENST00000289153 | 5919 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |