Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL122001.1-201ENST00000457027 370 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 MTCO2P29-201ENST00000465212 189 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 UBE2V1P12-201ENST00000503954 474 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AC009646.1-201ENST00000510455 318 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 MIR5697-201ENST00000578045 78 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AC091135.1-201ENST00000585943 307 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 MTCO2P2-201ENST00000591258 225 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AC022022.2-201ENST00000602989 360 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AL136363.2-201ENST00000604173 851 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 BNIP3P10-201ENST00000605360 577 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 RMST_7.1-201ENST00000621935 268 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 RNU6-527P-201ENST00000363425 104 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RNA5SP493-201ENST00000364115 91 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RNU6-371P-201ENST00000364283 108 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RNU2-39P-201ENST00000410604 198 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RPL21P90-201ENST00000415692 466 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AL354941.1-201ENST00000438600 464 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AL009048.1-201ENST00000450437 298 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RPS29P23-201ENST00000458635 123 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 RNU6-333P-201ENST00000459117 107 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AC117522.1-201ENST00000509821 380 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AF131216.2-201ENST00000512316 564 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AL356057.1-201ENST00000533798 831 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 DNAJC19P9-201ENST00000555084 351 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 MIR4303-201ENST00000581299 66 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AP000811.1-201ENST00000603803 651 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AC016727.1-205ENST00000605437 569 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 snoU13.31-201ENST00000607291 104 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.04□□□□□ -2.24
UPK3BQ9BT76 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 AL157786.1-207ENST00000627771 695 ntBASIC1.04□□□□□ -2.24
UPK3BQ9BT76 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 RNU1-62P-201ENST00000362599 164 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 Y_RNA.67-201ENST00000362870 100 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 SNORA62.1-201ENST00000364287 154 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 RNU6-641P-201ENST00000384006 107 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 RNU6-39P-201ENST00000384344 107 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 SNORA24.1-201ENST00000384401 135 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 MIR544A-201ENST00000384855 91 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL357139.1-201ENST00000407792 426 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL031779.1-201ENST00000415663 330 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 C1DP2-201ENST00000418167 426 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC007098.1-201ENST00000420122 367 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 MTCO2P23-201ENST00000425216 680 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL590365.1-201ENST00000450788 243 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 MTCO3P9-201ENST00000506989 781 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AP002453.2-201ENST00000533503 320 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 TRAV32-201ENST00000553993 340 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 SUB1P3-201ENST00000564581 315 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC091489.2-201ENST00000566263 604 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL031775.1-201ENST00000607014 887 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC068944.2-201ENST00000610373 403 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC010608.3-201ENST00000625048 527 ntBASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
UPK3BQ9BT76 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.03□□□□□ -2.25
UPK3BQ9BT76 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.03□□□□□ -2.25
UPK3BQ9BT76 AL391994.1-201ENST00000254724 282 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU1-42P-201ENST00000364033 160 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU5E-7P-201ENST00000365290 117 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU6-1222P-201ENST00000384615 107 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AP1B1P2-201ENST00000416196 106 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 ELOCP4-201ENST00000420090 333 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 SDAD1P3-201ENST00000427380 333 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 MED13P1-201ENST00000428342 171 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RPS24P1-201ENST00000438550 371 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 CR769776.1-201ENST00000441254 787 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC007969.2-201ENST00000441891 191 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AL360271.2-201ENST00000447710 161 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 snoU13.9-201ENST00000458927 103 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC023790.1-201ENST00000482174 347 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms