Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 snoU2_19.1-201ENST00000362361 80 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNU6-289P-201ENST00000364093 107 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 SNORA4.1-201ENST00000364263 144 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 SNORA18.2-201ENST00000383865 132 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 SNORA75B-201ENST00000384053 137 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 MIR222-201ENST00000384992 110 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 MIR548B-201ENST00000385247 97 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 BTF3L4P1-201ENST00000413813 468 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 MTND4P20-201ENST00000424125 869 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 FTH1P25-201ENST00000447665 469 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 PAXBP1P1-201ENST00000449315 447 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNA5SP269-201ENST00000459032 137 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AL163195.1-201ENST00000496941 348 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNU6-1053P-201ENST00000515930 101 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNA5SP437-201ENST00000517249 129 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AL512347.1-201ENST00000566420 503 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AP001004.1-201ENST00000582468 324 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AL136363.2-201ENST00000604173 851 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 BNIP3P31-201ENST00000604515 566 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AL022154.1-201ENST00000604698 785 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC063943.3-201ENST00000615562 356 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 AC120349.3-201ENST00000624377 529 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 OR4G3P-201ENST00000633500 913 ntBASIC0.48□□□□□ -2.33
LIMD2Q9BT23 RNU6-621P-201ENST00000364752 109 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 RN7SKP266-201ENST00000410232 287 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 Y_RNA.623-201ENST00000411128 95 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 UBE2D3P3-201ENST00000426992 425 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 Z82205.1-201ENST00000428456 297 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AL627311.1-201ENST00000431514 115 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 CALM1P1-201ENST00000442082 433 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 MTCO2P25-201ENST00000447065 681 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 MTND1P3-201ENST00000484956 952 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC145146.1-201ENST00000496370 254 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC103851.1-201ENST00000506833 274 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AF131216.2-201ENST00000512316 564 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 RNU6-322P-201ENST00000516010 103 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC026616.1-201ENST00000523157 525 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AP005136.1-201ENST00000579765 429 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 MTCO2P2-201ENST00000591258 225 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AL138889.2-201ENST00000603883 242 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 FAM71BP1-201ENST00000604431 523 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 BNIP3P10-201ENST00000605360 577 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC080078.3-201ENST00000605407 463 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC130324.3-201ENST00000614165 542 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC099654.8-201ENST00000637757 681 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 AC006927.2-201ENST00000639256 389 ntBASIC0.47□□□□□ -2.33
LIMD2Q9BT23 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 MIR412-201ENST00000362142 91 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU5B-4P-201ENST00000363508 111 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU5A-8P-201ENST00000364102 114 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU6-777P-201ENST00000364265 104 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU6-1019P-201ENST00000364424 107 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 MIR1305-201ENST00000408300 86 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU6-321P-201ENST00000410912 106 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU2-64P-201ENST00000411315 191 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 USP9YP33-201ENST00000412220 421 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC004941.2-201ENST00000427009 228 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RSL24D1P8-201ENST00000434442 492 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 GTF2IP13-201ENST00000438487 386 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC244505.5-201ENST00000443639 207 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC132479.1-201ENST00000449160 144 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AL583843.1-201ENST00000456070 346 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC108059.3-201ENST00000456388 214 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC006026.2-201ENST00000457376 180 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 HMGN2P9-201ENST00000476875 229 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 HMGN1P7-201ENST00000491722 313 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNU6-351P-201ENST00000516097 100 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 RNA5SP490-201ENST00000517141 136 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC136628.3-201ENST00000521868 290 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 CBX3P8-201ENST00000532412 525 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC109446.2-201ENST00000567872 497 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC008088.1-201ENST00000580993 280 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 VN1R107P-201ENST00000601784 209 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AL391001.1-201ENST00000602747 715 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AL353778.1-201ENST00000603149 408 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms