Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC123912.5-201ENST00000605470 343 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 HULC.1-201ENST00000612720 240 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 RNU6-1085P-201ENST00000363576 107 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 Y_RNA.436-201ENST00000384097 102 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AIMP1P2-201ENST00000425294 312 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 VN1R108P-201ENST00000431580 830 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 MTND1P1-201ENST00000445453 368 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AL121594.1-201ENST00000475906 575 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CCDC34P1-201ENST00000507441 517 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AC008549.1-201ENST00000512900 643 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CYCSP27-201ENST00000527643 293 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AC078814.3-201ENST00000553036 491 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 VN1R107P-201ENST00000601784 209 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 AC005336.3-201ENST00000623833 2679 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
SDF4Q9BRK5 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.66□□□□□ -1.98
SDF4Q9BRK5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SDF4Q9BRK5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SDF4Q9BRK5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 Y_RNA.40-201ENST00000362645 93 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 RNU6-623P-201ENST00000363143 105 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 RNU6-82P-201ENST00000363970 107 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 SNORA69-201ENST00000383895 132 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 CALM2P3-201ENST00000400429 449 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 CBX3P9-201ENST00000402326 552 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AL135786.1-201ENST00000415892 214 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 IMMP1LP2-201ENST00000552954 492 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 OR11H5P-201ENST00000554039 926 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AC093249.1-201ENST00000567049 203 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SDF4Q9BRK5 Z82209.1-201ENST00000422141 2135 ntBASIC2.65□□□□□ -1.99
SDF4Q9BRK5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 MIRLET7G-201ENST00000362280 84 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RPS29P13-201ENST00000402041 169 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 SNORA3.2-201ENST00000408221 125 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AF274854.1-201ENST00000413236 615 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 MTCO3P41-201ENST00000414801 328 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RPL39P29-201ENST00000447779 157 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RPL30P12-201ENST00000474666 353 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 ANXA2P1-201ENST00000505539 926 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 Y_RNA.693-201ENST00000516641 110 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 RNU6-835P-201ENST00000516974 104 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AP000889.2-201ENST00000532684 490 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AL138976.2-201ENST00000563989 694 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 MIR3945-201ENST00000581853 98 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AC091135.1-201ENST00000585943 307 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 BNIP3P16-201ENST00000589779 534 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AC087241.4-201ENST00000612441 480 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 AC245884.12-201ENST00000615364 59 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 ZNF658B-202ENST00000615961 3375 ntBASIC2.64□□□□□ -1.99
SDF4Q9BRK5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SDF4Q9BRK5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RNU6-212P-201ENST00000362642 104 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RNU4-75P-201ENST00000364621 146 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RNU1-148P-201ENST00000384472 162 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 MIR561-201ENST00000385216 97 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AL117339.3-201ENST00000418733 162 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 DLGAP5P1-201ENST00000430307 464 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 MTCO2P7-201ENST00000446518 666 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 MTCO3P38-201ENST00000468910 766 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AC068781.1-201ENST00000488231 618 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RPL30P1-201ENST00000488676 339 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AC019235.1-201ENST00000503847 207 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
SDF4Q9BRK5 RNU6-586P-201ENST00000517265 104 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms