Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 MIR6835-201ENST00000621552 64 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 AC099654.8-201ENST00000637757 681 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
SCAF11Q99590 RNU6-942P-201ENST00000363002 107 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 SNORA4.3-201ENST00000365564 137 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SCAF11Q99590 RN7SKP61-201ENST00000410642 295 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAF11Q99590 RAC1P6-201ENST00000423911 575 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAF11Q99590 AC008267.5-201ENST00000424928 265 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.06□□□□□ -2.24
SCAF11Q99590 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.06□□□□□ -2.24
SCAF11Q99590 RPL39P29-201ENST00000447779 157 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AC016550.1-201ENST00000505348 785 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 SNORA31.19-201ENST00000517079 126 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
SCAF11Q99590 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAF11Q99590 AC004812.1-201ENST00000540773 146 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.06□□□□□ -2.24
SCAF11Q99590 AC136619.2-201ENST00000563361 631 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AC009712.1-201ENST00000564938 316 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AC022254.1-201ENST00000567857 235 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 BNIP3P27-201ENST00000599991 412 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AL596327.1-201ENST00000603629 213 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 AL358072.1-201ENST00000604156 575 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 U1.36-201ENST00000620684 176 ntBASIC1.06□□□□□ -2.24
SCAF11Q99590 RNU6-858P-201ENST00000362436 107 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 Y_RNA.390-201ENST00000383932 102 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 Y_RNA.472-201ENST00000384322 102 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 SNORA40C-201ENST00000391285 128 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU2-48P-201ENST00000410694 191 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 EIF4EP2-201ENST00000422816 654 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.05□□□□□ -2.24
SCAF11Q99590 RPS25P9-201ENST00000435591 252 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC245102.2-201ENST00000448956 180 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC012308.1-201ENST00000451232 178 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 FAM206BP-201ENST00000510179 541 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 RNA5SP216-201ENST00000516111 123 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU2-53P-201ENST00000516257 147 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.05□□□□□ -2.24
SCAF11Q99590 AL606834.3-201ENST00000602615 496 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC007363.1-201ENST00000604736 620 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU6-88P-201ENST00000606801 100 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU6-222P-201ENST00000362438 107 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU6-817P-201ENST00000391083 104 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCAF11Q99590 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCAF11Q99590 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.05□□□□□ -2.24
SCAF11Q99590 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.05□□□□□ -2.24
SCAF11Q99590 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU6-496P-201ENST00000516145 99 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.05□□□□□ -2.24
SCAF11Q99590 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.05□□□□□ -2.24
SCAF11Q99590 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.05□□□□□ -2.24
SCAF11Q99590 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCAF11Q99590 AC098614.4-201ENST00000607601 462 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 uc_338.15-201ENST00000615470 191 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 AC087588.2-201ENST00000617667 426 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.05□□□□□ -2.24
SCAF11Q99590 RNU6-546P-201ENST00000383991 107 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 RNU6-611P-201ENST00000384276 104 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 RNU6-166P-201ENST00000384371 107 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCAF11Q99590 MIR1262-201ENST00000408276 93 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 MIR1305-201ENST00000408300 86 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 UBE2V1P4-201ENST00000425374 344 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.04□□□□□ -2.24
SCAF11Q99590 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 AC109927.2-201ENST00000506416 303 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 AC116353.3-201ENST00000511215 249 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 SNORA19.3-201ENST00000516165 130 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAF11Q99590 CLIC4P2-201ENST00000601934 717 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AC073410.2-201ENST00000603240 332 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AL355472.4-201ENST00000610233 626 ntBASIC1.04□□□□□ -2.24
SCAF11Q99590 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.04□□□□□ -2.24
SCAF11Q99590 RNU6-1010P-201ENST00000362757 107 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 RNU5A-8P-201ENST00000364102 114 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 RNU6-1257P-201ENST00000384625 110 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.03□□□□□ -2.24
SCAF11Q99590 RNU6-1025P-201ENST00000410629 104 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 VPS26BP1-201ENST00000417155 755 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 TIMM9P1-201ENST00000436122 256 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 AL117351.1-201ENST00000438864 766 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAF11Q99590 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAF11Q99590 PRELID3BP1-201ENST00000457142 540 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 MTND1P3-201ENST00000484956 952 ntBASIC1.03□□□□□ -2.24
SCAF11Q99590 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms