Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH4Q99466 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH4Q99466 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH4Q99466 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.82□□□□□ -1.96
NOTCH4Q99466 SNORD27-201ENST00000363981 72 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 Y_RNA.222-201ENST00000364264 102 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU6-200P-201ENST00000364743 107 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 SNORA23-201ENST00000365128 182 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 Y_RNA.539-201ENST00000384635 107 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 SNORA69.1-201ENST00000390904 137 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 UBE2FP1-201ENST00000416536 447 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RPL30P3-201ENST00000424262 333 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 AL645568.3-201ENST00000433683 316 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU6-1132P-201ENST00000459214 107 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 HMGB1P25-201ENST00000468402 607 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC109446.1-201ENST00000566172 220 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 ELOCP5-201ENST00000604924 333 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 MIR6817-201ENST00000615588 66 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC006065.5-201ENST00000623427 349 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 Y_RNA.27-201ENST00000362540 103 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNA5SP391-201ENST00000363456 119 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU4-50P-201ENST00000364361 141 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU6-1317P-201ENST00000364582 104 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU6-14P-201ENST00000384630 106 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 AL591704.1-201ENST00000432574 275 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 SNORD108-201ENST00000459332 71 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 FO393415.2-201ENST00000480085 343 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC108860.1-201ENST00000484521 383 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 SNORA31.6-201ENST00000516241 130 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU4-77P-201ENST00000516692 156 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RNU6-182P-201ENST00000516970 105 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 DEFB108D-201ENST00000527787 222 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC025423.5-201ENST00000550230 219 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 RPL23AP84-201ENST00000571193 464 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AC009163.5-201ENST00000575421 637 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH4Q99466 LRRC37A5P-203ENST00000580181 585 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 AP001282.2-201ENST00000616149 309 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 ZNF734P-201ENST00000419494 1534 ntBASIC2.81□□□□□ -1.96
NOTCH4Q99466 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH4Q99466 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNU6-95P-201ENST00000384697 107 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNU6-1093P-201ENST00000391194 107 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 MTCO1P39-201ENST00000426148 480 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC004866.2-201ENST00000438285 481 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 OR2AQ1P-201ENST00000451972 200 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC135721.1-201ENST00000497954 479 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 MTND1P19-201ENST00000511780 315 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AL355812.1-201ENST00000603215 216 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC104763.2-201ENST00000604179 382 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC002044.1-201ENST00000606707 158 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNY1P16-201ENST00000363063 111 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 MIR1183-201ENST00000408856 89 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNU6-516P-201ENST00000411381 104 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RPS6P12-201ENST00000432491 726 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RPEP5-201ENST00000441137 268 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RPL7P5-201ENST00000471472 736 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNU6-237P-201ENST00000515985 71 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 RNA5SP320-201ENST00000516263 124 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 RN7SKP60-201ENST00000516985 239 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AL137100.2-201ENST00000555786 315 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
NOTCH4Q99466 AL670379.4-201ENST00000605279 254 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC012443.1-201ENST00000605605 231 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 AC006329.2-201ENST00000611491 394 ntBASIC2.8□□□□□ -1.96
NOTCH4Q99466 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NOTCH4Q99466 AC093831.2-201ENST00000624393 3427 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms