Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 TPT1P7-201ENST00000458300 517 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 MTCO3P38-201ENST00000468910 766 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.8□□□□□ -2.12
SCN2AQ99250 RNA5SP112-201ENST00000515937 99 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 SNORA19.2-201ENST00000516013 114 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 SNORA31.6-201ENST00000516241 130 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 Y_RNA.687-201ENST00000516558 91 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-430P-201ENST00000517078 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC010186.2-204ENST00000537668 439 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 SUB1P3-201ENST00000564581 315 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 MYL12BP1-201ENST00000569826 507 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC090616.3-201ENST00000582184 217 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-6P-201ENST00000606623 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC103591.3-201ENST00000608684 209 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC004908.3-201ENST00000610248 625 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC024940.5-201ENST00000622889 474 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-623P-201ENST00000363143 105 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-1210P-201ENST00000363775 107 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-1072P-201ENST00000384703 107 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-443P-201ENST00000384780 107 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SCN2AQ99250 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 MTCYBP8-201ENST00000422855 651 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SCN2AQ99250 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN2AQ99250 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC124916.1-201ENST00000444020 547 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AC092436.1-201ENST00000506450 503 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 MTND3P25-201ENST00000509243 135 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC069113.1-201ENST00000517763 267 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN2AQ99250 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN2AQ99250 RPS15AP11-201ENST00000594193 385 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC093783.1-201ENST00000612976 329 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 Y_RNA.783-201ENST00000613546 102 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AL359880.1-201ENST00000621879 266 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN2AQ99250 Z75746.1-201ENST00000440243 2080 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN2AQ99250 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-78P-201ENST00000362897 107 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-220P-201ENST00000390919 107 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN2AQ99250 ARL5AP1-201ENST00000418991 388 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AL031659.1-201ENST00000447075 539 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 RNU6-189P-201ENST00000516120 101 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 AL670379.4-201ENST00000605279 254 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 U2.17-201ENST00000611454 95 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AC007014.2-201ENST00000615581 479 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 AL353997.5-201ENST00000618886 171 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN2AQ99250 MTND4P23-201ENST00000447723 1363 ntBASIC1.79□□□□□ -2.12
SCN2AQ99250 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU4-40P-201ENST00000364351 143 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 MIR578-201ENST00000384828 96 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU4-55P-201ENST00000410731 137 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU6-607P-201ENST00000411283 108 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN2AQ99250 RPL23AP36-201ENST00000413895 458 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC007677.1-201ENST00000445757 515 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC073415.1-201ENST00000449240 153 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU7-138P-201ENST00000459479 64 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN2AQ99250 AC018437.1-201ENST00000492214 406 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RPL38P4-201ENST00000502376 214 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN2AQ99250 AC105313.1-201ENST00000509121 353 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU1-86P-201ENST00000516108 154 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 RNU1-107P-201ENST00000516617 154 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 IGLV3-17-201ENST00000519099 244 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC090115.3-201ENST00000553218 849 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC121758.2-201ENST00000553271 193 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 HMGB1P33-201ENST00000563485 527 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN2AQ99250 AC093249.1-201ENST00000567049 203 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 MIR3199-1-201ENST00000582434 88 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN2AQ99250 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.12
SCN2AQ99250 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.13
SCN2AQ99250 MIR95-201ENST00000385072 81 ntBASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms