Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.4□□□□□ -2.35
IFT140Q96RY7 MTCYBP40-201ENST00000509390 1135 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AC005741.1-201ENST00000511094 432 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.4□□□□□ -2.35
IFT140Q96RY7 AC022861.1-201ENST00000522981 663 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AF038458.1-201ENST00000588406 262 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AL138726.1-201ENST00000614873 333 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
IFT140Q96RY7 RNU6-28P-201ENST00000362378 107 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 RNU6-839P-201ENST00000363347 108 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 Y_RNA.255-201ENST00000364581 97 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 Z95118.1-201ENST00000421372 247 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 HSPE1P9-201ENST00000440046 311 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 MTND2P4-201ENST00000445034 1004 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 RPL37P6-201ENST00000460682 294 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 RNU6-1092P-201ENST00000516955 87 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC023050.2-201ENST00000544968 387 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC015688.6-201ENST00000577737 104 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC024060.1-201ENST00000607052 494 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 AP001033.2-201ENST00000609701 1003 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC084824.4-201ENST00000620106 731 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.39□□□□□ -2.35
IFT140Q96RY7 AC134026.1-201ENST00000623249 2239 ntBASIC0.39□□□□□ -2.35
IFT140Q96RY7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.38□□□□□ -2.35
IFT140Q96RY7 SNRPEP3-201ENST00000338402 276 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 MIR186-201ENST00000384988 86 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.38□□□□□ -2.35
IFT140Q96RY7 RPL23AP95-201ENST00000426806 265 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 C8orf59P1-201ENST00000429930 303 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 AL606489.2-201ENST00000433886 234 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.38□□□□□ -2.35
IFT140Q96RY7 MTND4P6-201ENST00000438297 472 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 MTND5P14-201ENST00000441481 1267 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 FABP5P15-201ENST00000453566 214 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 AC023194.1-201ENST00000493084 308 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.38□□□□□ -2.35
IFT140Q96RY7 EIF1AXP2-201ENST00000555940 413 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 MIR5094-201ENST00000578766 85 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 MIR4802-201ENST00000581881 80 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 TUG1_2.1-201ENST00000614234 87 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 RMST_10.1-201ENST00000616309 154 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 AL590240.4-201ENST00000616908 390 ntBASIC0.38□□□□□ -2.35
IFT140Q96RY7 RNU6-944P-201ENST00000364023 107 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 AC114482.1-201ENST00000418010 247 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.37□□□□□ -2.35
IFT140Q96RY7 AC130509.1-201ENST00000464158 433 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.37□□□□□ -2.35
IFT140Q96RY7 TRBVA-201ENST00000498804 316 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 RNU6-390P-201ENST00000516259 103 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 RNA5SP503-201ENST00000517047 117 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 HMGB1P33-201ENST00000563485 527 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 AL353997.4-201ENST00000586196 166 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 AC133794.1-201ENST00000602731 914 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 AC018926.1-201ENST00000616335 435 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 FARSBP1-201ENST00000435808 1778 ntBASIC0.37□□□□□ -2.35
IFT140Q96RY7 SNORD114-24-201ENST00000365029 72 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 RNU6-754P-201ENST00000391166 107 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 RPS26P5-201ENST00000418544 335 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 Z99497.1-201ENST00000421282 135 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 MTCO2P5-201ENST00000422621 426 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 GTF2IP3-201ENST00000433887 494 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 TIMM9P1-201ENST00000436122 256 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 snoU13.8-201ENST00000458890 104 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.36□□□□□ -2.35
IFT140Q96RY7 BET1P1-201ENST00000482276 359 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 SNORA70.22-201ENST00000517160 124 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC090142.3-201ENST00000519012 385 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.36□□□□□ -2.35
IFT140Q96RY7 AL590705.4-201ENST00000532209 134 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.36□□□□□ -2.35
IFT140Q96RY7 AL390208.1-201ENST00000605885 644 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 uc_338.15-201ENST00000615470 191 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC009032.1-201ENST00000617574 431 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 AC132825.7-201ENST00000638744 335 ntBASIC0.36□□□□□ -2.35
IFT140Q96RY7 RNU6-1066P-201ENST00000363573 105 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU6-512P-201ENST00000364438 103 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU6-898P-201ENST00000365627 104 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 MIR19B1-201ENST00000384829 87 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU6-796P-201ENST00000391086 107 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 ISCA1P1-201ENST00000426679 387 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 MTCYBP11-201ENST00000447254 1109 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RPL39P6-201ENST00000448289 150 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 MIR4782-201ENST00000577987 79 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms