Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RNU6-864P-201ENST00000516256 108 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RNU6-612P-201ENST00000516909 102 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RNU6-273P-201ENST00000516937 96 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RN7SKP272-201ENST00000516988 232 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC087241.2-201ENST00000535801 324 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 TRAV32-201ENST00000553993 340 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC023824.2-201ENST00000566185 400 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC023043.2-201ENST00000589678 1026 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AP001836.1-201ENST00000604675 523 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AL138726.1-201ENST00000614873 333 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC008121.3-201ENST00000618726 433 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC009248.2-201ENST00000619826 254 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 Y_RNA.160-201ENST00000363677 92 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 RNU6-43P-201ENST00000384302 107 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 RNU6-831P-201ENST00000384548 107 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC008267.5-201ENST00000424928 265 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AL645568.3-201ENST00000433683 316 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AL121594.1-201ENST00000475906 575 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 SRIP1-201ENST00000489235 288 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC110794.1-201ENST00000505816 425 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC107953.1-201ENST00000522216 297 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 MIR3672-201ENST00000584290 82 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 AL022345.1-201ENST00000607292 135 ntBASIC2.64□□□□□ -1.99
NR1H4Q96RI1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H4Q96RI1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RNU1-33P-201ENST00000364249 162 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RNU4-56P-201ENST00000364700 142 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 SNORA48.7-201ENST00000391302 135 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 CBX3P9-201ENST00000402326 552 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 SNORA11-201ENST00000408789 128 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RNU6-325P-201ENST00000411132 105 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AL030996.1-201ENST00000411430 235 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AP000275.1-201ENST00000411943 390 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AL139396.1-201ENST00000421137 167 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AL590556.1-201ENST00000423231 483 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 USP9YP28-201ENST00000435142 589 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 IFNA20P-201ENST00000436840 528 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC244670.1-201ENST00000436879 112 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RPL32P28-201ENST00000443577 397 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC008526.1-201ENST00000509149 338 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 RNU4-49P-201ENST00000516080 140 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 HSPE1P4-201ENST00000550617 308 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC007375.1-201ENST00000554513 578 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 MYL12BP1-201ENST00000569826 507 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 MIR3942-201ENST00000585264 109 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AL159153.1-201ENST00000619688 317 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AP000560.1-201ENST00000624150 1937 ntBASIC2.63□□□□□ -1.99
NR1H4Q96RI1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.63□□□□□ -1.99
NR1H4Q96RI1 AL161912.2-201ENST00000565707 3007 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 CBX3P1-201ENST00000325243 554 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RNU6-227P-201ENST00000362865 103 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 SNORA38-201ENST00000363946 132 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 SNORD116-11-201ENST00000383882 92 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 SNORA7.4-201ENST00000384249 137 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RNU6-790P-201ENST00000384479 105 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 FGF7P8-201ENST00000402994 292 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RN7SL863P-201ENST00000462370 296 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC130509.1-201ENST00000464158 433 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RPL30P1-201ENST00000488676 339 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC016632.1-201ENST00000503994 196 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC022447.4-201ENST00000504053 364 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RPL39P5-202ENST00000512505 151 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AP005902.1-201ENST00000521358 186 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms