Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU1-23P-201ENST00000363361 144 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 U3.13-201ENST00000364804 214 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 RNU6-641P-201ENST00000384006 107 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 SNORD116-20-201ENST00000384529 92 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 CISD1P1-201ENST00000393907 327 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 RPS3AP36-201ENST00000398190 775 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AL591034.2-201ENST00000402839 359 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 OR9R1P-201ENST00000412200 877 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 RPS20P15-201ENST00000412792 311 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 PGBD4P6-201ENST00000421501 610 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC108667.1-201ENST00000428618 249 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 IFNA20P-201ENST00000436840 528 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 MTND6P13-201ENST00000443510 523 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC007677.1-201ENST00000445757 515 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 snoU109.1-201ENST00000459339 135 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC008088.1-201ENST00000580993 280 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 AC108479.2-201ENST00000617314 601 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.61□□□□□ -2.15
COL21A1Q96P44 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
COL21A1Q96P44 ZNF702P-202ENST00000434269 1966 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL21A1Q96P44 RNU6-179P-201ENST00000363350 107 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 RNU6-546P-201ENST00000383991 107 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 RNU6-1179P-201ENST00000384667 107 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 MTCYBP36-201ENST00000404146 440 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 Y_RNA.598-201ENST00000410480 95 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 RNA5SP450-201ENST00000411206 102 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC074117.2-201ENST00000417130 397 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 UBE2D3P4-201ENST00000441973 436 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 CALM1P1-201ENST00000442082 433 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 RPS27AP8-201ENST00000452665 445 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC006512.1-201ENST00000468816 291 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AP001025.1-201ENST00000486139 332 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC010486.3-201ENST00000511602 785 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 SNORA43.2-201ENST00000516652 128 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC106038.2-201ENST00000520706 568 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AP003181.2-201ENST00000528941 181 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 RPL21P5-201ENST00000554662 472 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC104581.2-201ENST00000572227 430 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 MIR3682-201ENST00000581338 84 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 Z99497.2-201ENST00000603634 310 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AL022161.1-201ENST00000604390 213 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC121247.2-201ENST00000604776 136 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC027807.2-201ENST00000616099 408 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 RMST_4.1-201ENST00000616886 107 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AC091931.1-201ENST00000623488 728 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 AL157786.1-207ENST00000627771 695 ntBASIC1.6□□□□□ -2.15
COL21A1Q96P44 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
COL21A1Q96P44 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 MTND5P17-201ENST00000418405 1603 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 SNORD3E-201ENST00000362899 217 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 SNORA24.1-201ENST00000384401 135 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 FABP5P5-201ENST00000515537 406 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 Y_RNA.687-201ENST00000516558 91 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 RNU6-685P-201ENST00000517088 95 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC060788.1-201ENST00000521318 469 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC025678.1-201ENST00000567861 338 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC092354.1-201ENST00000606057 376 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC012360.2-201ENST00000609349 391 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 MIR3974-201ENST00000637126 96 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 AC099654.13-201ENST00000639774 207 ntBASIC1.59□□□□□ -2.15
COL21A1Q96P44 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
COL21A1Q96P44 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL21A1Q96P44 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.58□□□□□ -2.16
COL21A1Q96P44 RNU4-21P-201ENST00000362802 126 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms