Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC120024.3-201ENST00000603167 156 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 MIR3674-201ENST00000636576 68 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 AC118273.1-201ENST00000525324 3006 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 RNA5SP432-201ENST00000362480 116 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-527P-201ENST00000363425 104 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 U3.37-201ENST00000408528 213 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 AC007738.1-201ENST00000413892 348 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 RPS26P45-201ENST00000471748 340 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-781P-201ENST00000516377 101 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 AC244107.2-201ENST00000611773 76 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 AC019206.1-201ENST00000621938 425 ntBASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
CNTNAP3BQ96NU0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.120-201ENST00000363304 110 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.219-201ENST00000364232 113 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.281-201ENST00000364774 94 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AL162151.2-201ENST00000448875 158 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 RPL23AP70-201ENST00000483361 460 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 RNA5SP54-201ENST00000516951 92 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AC018630.3-201ENST00000542637 96 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SL703P-201ENST00000578485 302 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AC091178.2-201ENST00000584401 117 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AC136601.2-201ENST00000604356 474 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AC005000.2-201ENST00000605468 310 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 MAPK10-349ENST00000641767 3661 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 AL450345.1-202ENST00000605741 3881 ntBASIC4.49□□□□□ -1.69
CNTNAP3BQ96NU0 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 AL136164.4-201ENST00000625013 2135 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 MIR383-201ENST00000362257 73 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.346-201ENST00000365385 112 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 MIR488-201ENST00000365739 83 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 MIR34B-201ENST00000385076 84 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SKP53-201ENST00000411337 315 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 MLLT10P1-201ENST00000418346 262 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RPL36AP10-201ENST00000421785 322 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 HSPE1P21-201ENST00000438283 308 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SKP19-201ENST00000516016 252 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA43.2-201ENST00000516652 128 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 AC099654.7-201ENST00000635788 2127 ntBASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP3BQ96NU0 AL592182.3-201ENST00000642132 3304 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AC000123.3-201ENST00000624029 4975 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-820P-201ENST00000384273 107 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 MIR29B2-201ENST00000385055 81 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 RPL21P17-201ENST00000397467 475 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AL512633.1-201ENST00000399931 655 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 RPS3AP1-201ENST00000413190 320 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 EDDM3CP-201ENST00000415977 425 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AC074117.2-201ENST00000417130 397 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AL500522.2-201ENST00000448562 343 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-412P-201ENST00000516434 106 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SKP289-201ENST00000517244 295 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms