Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC00479Q96M42 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC103988.1-201ENST00000566382 2177 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00479Q96M42 SNORD50.1-201ENST00000362987 71 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNA5SP50-201ENST00000363731 107 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-99P-201ENST00000364721 107 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU1-100P-201ENST00000365255 165 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-596P-201ENST00000365395 98 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-26P-201ENST00000383985 107 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 SNORD15B-201ENST00000384714 146 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 MIR181A2-201ENST00000384863 110 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNA5SP252-201ENST00000391131 119 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AL590004.2-201ENST00000404787 371 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 FTH1P15-201ENST00000406984 280 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 RPL26P27-201ENST00000414397 437 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC008267.5-201ENST00000424928 265 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 TOMM20P4-201ENST00000427861 435 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC034236.1-201ENST00000469891 373 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-976P-201ENST00000516086 111 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-1045P-201ENST00000516321 107 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-612P-201ENST00000516909 102 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 RNU6-56P-201ENST00000516986 93 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AP005902.1-201ENST00000521358 186 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC021739.1-201ENST00000559631 174 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 MIR4429-201ENST00000580105 73 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 MIR4273-201ENST00000582824 84 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC008737.2-201ENST00000599446 118 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00479Q96M42 AC133104.2-201ENST00000615272 193 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 MIR6134-201ENST00000617606 109 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 AL136164.4-201ENST00000625013 2135 ntBASIC2.28□□□□□ -2.04
LINC00479Q96M42 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 RNU6-490P-201ENST00000362985 107 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 RNU6-105P-201ENST00000363909 104 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 Y_RNA.252-201ENST00000364556 101 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 U3.19-201ENST00000390893 196 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00479Q96M42 RPS29P13-201ENST00000402041 169 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 SNORD88.1-201ENST00000408684 91 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 RNA5SP38-201ENST00000410750 119 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC096644.2-201ENST00000429278 159 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL714022.1-201ENST00000439897 151 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC011816.1-201ENST00000441346 546 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC243964.1-201ENST00000441814 261 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL590664.1-201ENST00000448065 339 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 RPL26P9-201ENST00000457466 433 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC091874.1-201ENST00000511402 339 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AP000867.2-201ENST00000532468 320 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 MIR3158-1-201ENST00000583596 81 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC006504.6-201ENST00000590142 199 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC023043.3-201ENST00000593113 385 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC024153.1-201ENST00000603103 365 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL355598.1-201ENST00000604169 202 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AP000787.2-201ENST00000604432 568 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL355802.3-201ENST00000607571 545 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 HMGB1P24-202ENST00000615653 685 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC068831.7-201ENST00000616954 363 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC009487.2-201ENST00000420969 6821 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00479Q96M42 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00479Q96M42 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00479Q96M42 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00479Q96M42 AC091812.1-201ENST00000432235 1948 ntBASIC2.27□□□□□ -2.05
LINC00479Q96M42 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC00479Q96M42 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC00479Q96M42 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LINC00479Q96M42 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC00479Q96M42 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00479Q96M42 AC073325.2-201ENST00000339545 159 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 RNU1-33P-201ENST00000364249 162 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 RNU6-933P-201ENST00000384424 107 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 MIR490-201ENST00000384865 128 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 Y_RNA.645-201ENST00000391229 102 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 RPL21P75-201ENST00000396599 483 ntBASIC2.26□□□□□ -2.05
LINC00479Q96M42 RPL21P28-201ENST00000401418 483 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms