Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-11P-201ENST00000364234 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 Y_RNA.255-201ENST00000364581 97 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-1280P-201ENST00000365211 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-25P-201ENST00000383873 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-1-201ENST00000383898 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-38P-201ENST00000384085 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-48P-201ENST00000384161 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-36P-201ENST00000384172 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-4P-201ENST00000384205 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-5P-201ENST00000384238 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-3P-201ENST00000384314 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-16P-201ENST00000384385 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-15P-201ENST00000384534 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-2-201ENST00000384627 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-29P-201ENST00000384637 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-9-201ENST00000384776 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-33P-201ENST00000384793 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RPL17P50-201ENST00000396131 546 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-908P-201ENST00000410160 94 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 BX276092.3-201ENST00000424182 230 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RPL30P4-201ENST00000429309 333 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 USP9YP8-201ENST00000441913 500 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-333P-201ENST00000459117 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AL163973.1-201ENST00000484753 577 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC008526.1-201ENST00000509149 338 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 RPL39P5-202ENST00000512505 151 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 SMURF2P1-201ENST00000514992 481 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 Y_RNA.693-201ENST00000516641 110 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 SNORD19.2-201ENST00000516978 73 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 EIF1P4-201ENST00000572664 335 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 MIR3162-201ENST00000581818 82 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC012507.3-201ENST00000603556 477 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-6P-201ENST00000606623 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RMST_3.1-201ENST00000611651 109 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 uc_338.14-201ENST00000613162 166 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RMST_4.1-201ENST00000616886 107 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC139792.2-201ENST00000624218 587 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AC243829.7-201ENST00000633081 225 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 AP000553.5-201ENST00000641933 54 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LINC00477Q96M19 RBBP8P1-201ENST00000449447 1844 ntBASIC1.59□□□□□ -2.16
LINC00477Q96M19 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00477Q96M19 OR56A5-201ENST00000340110 738 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 RNU6-428P-201ENST00000362942 107 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 RNU6-623P-201ENST00000363143 105 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00477Q96M19 SNORD73A-201ENST00000386062 65 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 RNU2-40P-201ENST00000410833 196 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 RNU6-1148P-201ENST00000410992 104 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL627311.1-201ENST00000431514 115 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL021397.1-201ENST00000451806 248 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 BTF3P15-201ENST00000455606 336 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC112771.1-201ENST00000463581 102 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC083798.1-201ENST00000472671 131 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00477Q96M19 RNU6-506P-201ENST00000516553 94 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 SNORA31.23-201ENST00000517219 133 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 AL512360.1-201ENST00000555346 234 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00477Q96M19 MIR4287-201ENST00000579398 78 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 AC009314.1-201ENST00000603871 304 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 CTHRC1P1-201ENST00000605383 469 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00477Q96M19 uc_338.20-201ENST00000621563 178 ntBASIC1.58□□□□□ -2.16
LINC00477Q96M19 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-78P-201ENST00000362897 107 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-1159P-201ENST00000362933 107 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-529P-201ENST00000363383 104 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-522P-201ENST00000364497 107 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 Y_RNA.324-201ENST00000365165 102 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-393P-201ENST00000384475 107 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 SNORD116-20-201ENST00000384529 92 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU6-19P-201ENST00000384718 107 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 SNORA11.4-201ENST00000408823 129 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 RNU4-46P-201ENST00000410818 138 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 PTGES3P4-201ENST00000426243 356 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 HMGB1P31-201ENST00000437242 427 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AL353689.1-201ENST00000438895 199 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 PRPS1P1-201ENST00000445305 876 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 NDUFB1P2-201ENST00000449477 176 ntBASIC1.57□□□□□ -2.16
LINC00477Q96M19 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.57□□□□□ -2.16
LINC00477Q96M19 SRRM1P2-201ENST00000464531 1192 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms