Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 DEFB122-202ENST00000569013 197 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AL161423.1-201ENST00000613700 262 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC015540.1-201ENST00000615828 501 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 uc_338.34-201ENST00000617467 174 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC139792.3-201ENST00000623525 224 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 RNU6-266P-201ENST00000364225 107 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 Y_RNA.381-201ENST00000365666 102 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 Y_RNA.517-201ENST00000384551 106 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 RNU4-26P-201ENST00000410270 107 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AL096701.2-201ENST00000416920 238 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC016691.1-201ENST00000441321 413 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 MRPL50P4-201ENST00000446432 475 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC008571.1-201ENST00000467232 300 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 SNRPGP7-201ENST00000469016 106 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 Y_RNA.655-201ENST00000515919 96 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 RNU6-826P-201ENST00000516827 104 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 EIF1P4-201ENST00000572664 335 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC025165.5-201ENST00000602802 578 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC107304.1-201ENST00000604229 296 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AL158209.2-201ENST00000619266 216 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AL359880.1-201ENST00000621879 266 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 AC124864.2-201ENST00000624736 186 ntBASIC2.23□□□□□ -2.05
SNRNP40Q96DI7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 Y_RNA.255-201ENST00000364581 97 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 RNU1-148P-201ENST00000384472 162 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 MIR764-201ENST00000390811 85 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 RNU6-1158P-201ENST00000391167 107 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AF274854.1-201ENST00000413236 615 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 SNORD56-201ENST00000413522 71 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AL606489.2-201ENST00000433886 234 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 MTND1P1-201ENST00000445453 368 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC073415.1-201ENST00000449240 153 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 RNU7-167P-201ENST00000459160 62 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 SNORA4.4-201ENST00000515921 135 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 SNORA40.12-201ENST00000516329 111 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 RNU6-720P-201ENST00000516363 108 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC025754.2-201ENST00000606491 432 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC046143.2-201ENST00000609789 160 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC068792.1-201ENST00000621354 417 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AP003400.5-201ENST00000624827 617 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 MIR6863-201ENST00000636112 90 ntBASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SNRNP40Q96DI7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNU6-105P-201ENST00000363909 104 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 SNORA25B-201ENST00000365507 128 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.399-201ENST00000383955 105 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNU6-1106P-201ENST00000390845 107 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 MTCO3P40-201ENST00000392516 676 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 CBX3P9-201ENST00000402326 552 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNU6-293P-201ENST00000411259 106 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AL121601.2-201ENST00000438019 707 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 USP9YP8-201ENST00000441913 500 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 CACYBPP2-201ENST00000453625 678 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP281-201ENST00000516504 135 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AC104383.1-201ENST00000530297 370 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AC022880.1-201ENST00000534017 973 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 MTCO3P23-201ENST00000561363 289 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms