Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 VN1R108P-201ENST00000431580 830 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 MTND1P1-201ENST00000445453 368 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RPL23AP7-203ENST00000449021 469 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC012308.1-201ENST00000451232 178 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RPS3P1-201ENST00000456781 192 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC025033.1-201ENST00000463883 194 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 MTCO3P38-201ENST00000468910 766 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL121594.1-201ENST00000475906 575 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC019235.1-201ENST00000503847 207 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 CCDC34P1-201ENST00000507441 517 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP356-201ENST00000515972 94 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC069113.1-201ENST00000517763 267 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 MTND4P7-201ENST00000523876 130 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC022880.1-201ENST00000534017 973 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 EIF4BP1-201ENST00000554881 351 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 BNIP3P16-201ENST00000589779 534 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC009314.1-201ENST00000603871 304 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL033523.1-201ENST00000605153 153 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 U2.17-201ENST00000611454 95 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 HULC.1-201ENST00000612720 240 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 MIR6766-201ENST00000622641 72 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC007792.1-201ENST00000623023 402 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AC091932.3-201ENST00000624223 323 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 OR5AK4P-201ENST00000635912 903 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 MIR6863-201ENST00000636112 90 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 SNORA80A-201ENST00000363922 136 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 SNORA48.3-201ENST00000391081 134 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL021397.1-201ENST00000451806 248 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL109933.2-201ENST00000452651 260 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 RNU2-53P-201ENST00000516257 147 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP148-201ENST00000516527 94 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 RN7SKP256-201ENST00000517201 314 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 MIR5007-201ENST00000583098 95 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC006023.1-201ENST00000603944 259 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL356157.2-201ENST00000605122 111 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC002044.1-201ENST00000606707 158 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AC008121.3-201ENST00000618726 433 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 AL158209.2-201ENST00000619266 216 ntBASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
RPUSD4Q96CM3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-37P-201ENST00000362692 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-655P-201ENST00000362858 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SNORD56.1-201ENST00000362913 68 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SNORA5B-201ENST00000363786 132 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-11P-201ENST00000364234 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-25P-201ENST00000383873 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1-201ENST00000383898 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-48P-201ENST00000384161 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-36P-201ENST00000384172 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-4P-201ENST00000384205 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-5P-201ENST00000384238 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-3P-201ENST00000384314 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-16P-201ENST00000384385 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU1-148P-201ENST00000384472 162 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-15P-201ENST00000384534 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-2-201ENST00000384627 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-29P-201ENST00000384637 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-9-201ENST00000384776 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-33P-201ENST00000384793 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 MIR514A2-201ENST00000385131 88 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 MIR514A3-201ENST00000385132 88 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SNORA11.1-201ENST00000408133 129 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC138623.1-201ENST00000418060 216 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 USP9YP18-201ENST00000425912 695 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AL591043.1-201ENST00000432461 424 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 MTCO2P7-201ENST00000446518 666 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RPL30P1-201ENST00000488676 339 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC234781.5-201ENST00000508429 271 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SNORA25.11-201ENST00000515935 105 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms