Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU4-24P-201ENST00000364565 139 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 EDDM3CP-201ENST00000415977 425 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AL117339.3-201ENST00000418733 162 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC243964.1-201ENST00000441814 261 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 PSPHP1-201ENST00000450062 261 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 RPL9P6-201ENST00000492764 598 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 SNORA4.4-201ENST00000515921 135 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC034114.1-201ENST00000520293 285 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC090115.3-201ENST00000553218 849 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 MIR4424-201ENST00000585257 86 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC104984.5-201ENST00000586878 94 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 RNU6-85P-201ENST00000605989 107 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC103591.3-201ENST00000608684 209 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 MIR6817-201ENST00000615588 66 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SKA1Q96BD8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 SNORA69-201ENST00000383895 132 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 USP9YP18-201ENST00000425912 695 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 DNAJC19P4-201ENST00000440115 345 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 MTCO3P38-201ENST00000468910 766 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 TRBV12-1-201ENST00000479785 344 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 AP000763.2-201ENST00000540641 163 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 AC026271.5-201ENST00000577873 130 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AC104237.2-201ENST00000612456 443 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 AL359880.1-201ENST00000621879 266 ntBASIC2.68□□□□□ -1.98
SKA1Q96BD8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SKA1Q96BD8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SKA1Q96BD8 snoU2_19.1-201ENST00000362361 80 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 RNU6-82P-201ENST00000363970 107 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 RNU6-827P-201ENST00000365553 106 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 RNU6-546P-201ENST00000383991 107 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 RPS29P13-201ENST00000402041 169 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 SNORD23.1-201ENST00000408212 104 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 AL353752.1-201ENST00000454946 260 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 CCDC34P1-201ENST00000507441 517 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 RNU6-189P-201ENST00000516120 101 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 RNU7-193P-201ENST00000516723 65 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 OR11H5P-201ENST00000554039 926 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 AC103987.3-201ENST00000582071 292 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 VN1R80P-201ENST00000597126 338 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AC012640.5-201ENST00000623897 319 ntBASIC2.67□□□□□ -1.98
SKA1Q96BD8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SKA1Q96BD8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SKA1Q96BD8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
SKA1Q96BD8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SKA1Q96BD8 RNU4-66P-201ENST00000365199 138 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 RNU2-32P-201ENST00000411193 191 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 CR769767.1-201ENST00000436337 346 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 MTND1P1-201ENST00000445453 368 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.66□□□□□ -1.98
SKA1Q96BD8 TPTE2P5-203ENST00000458118 728 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 RNU7-138P-201ENST00000459479 64 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 SNRPGP7-201ENST00000469016 106 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC018868.1-201ENST00000491307 315 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC022447.4-201ENST00000504053 364 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC091885.1-201ENST00000506658 268 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.66□□□□□ -1.98
SKA1Q96BD8 SNORA14.1-201ENST00000516113 141 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 RNA5SP137-201ENST00000516833 135 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 CENPUP1-201ENST00000526649 1202 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AL512310.1-201ENST00000548639 172 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.66□□□□□ -1.98
SKA1Q96BD8 RPS3AP23-202ENST00000574601 686 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 AL356157.2-201ENST00000605122 111 ntBASIC2.66□□□□□ -1.98
SKA1Q96BD8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SKA1Q96BD8 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms