Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RN7SL517P-201ENST00000462240 305 ntBASIC4.82□□□□□ -1.64
HLA-CQ95604 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-CQ95604 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
HLA-CQ95604 AC093249.4-201ENST00000564755 259 ntBASIC4.82□□□□□ -1.64
HLA-CQ95604 MIR3613-201ENST00000579844 87 ntBASIC4.82□□□□□ -1.64
HLA-CQ95604 U6.95-201ENST00000636931 70 ntBASIC4.82□□□□□ -1.64
HLA-CQ95604 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-CQ95604 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-CQ95604 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-CQ95604 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-CQ95604 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
HLA-CQ95604 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-CQ95604 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-CQ95604 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-CQ95604 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-CQ95604 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-CQ95604 RNU1-75P-201ENST00000347264 129 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 U3.8-201ENST00000363675 217 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 RNU6-597P-201ENST00000365620 102 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-CQ95604 AC024614.2-201ENST00000577584 372 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 Y_RNA.757-201ENST00000578934 114 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 MIR6129-201ENST00000616087 109 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 MIR8059-201ENST00000620427 81 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 MIR3199-2-201ENST00000636243 86 ntBASIC4.81□□□□□ -1.64
HLA-CQ95604 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-CQ95604 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-CQ95604 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-CQ95604 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-CQ95604 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-CQ95604 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-CQ95604 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-CQ95604 AC004944.1-201ENST00000517807 3059 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 SNORA63.1-201ENST00000362493 131 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 U8.12-201ENST00000384701 133 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 MIR449B-201ENST00000384995 97 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 MIR483-201ENST00000385070 76 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 SNORA48.5-201ENST00000391143 135 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-CQ95604 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-CQ95604 AC146944.2-203ENST00000502493 354 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AC026726.1-201ENST00000512859 601 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AC139495.1-202ENST00000513164 354 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 RNA5SP154-201ENST00000516193 111 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 SNORD19.2-201ENST00000516978 73 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-CQ95604 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-CQ95604 AC025281.1-201ENST00000567026 265 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 MIR4660-201ENST00000583549 74 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-CQ95604 AC069200.1-201ENST00000609511 323 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 AC012640.5-201ENST00000623897 319 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-CQ95604 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 MAPK10-349ENST00000641767 3661 ntBASIC4.8□□□□□ -1.64
HLA-CQ95604 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-CQ95604 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-CQ95604 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-CQ95604 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 RNU6-915P-201ENST00000364943 103 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 RNU6-748P-201ENST00000384648 107 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-CQ95604 VDAC1P3-201ENST00000434069 851 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-CQ95604 RNU7-107P-201ENST00000459121 61 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 AC107626.1-201ENST00000471084 183 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 SRIP1-201ENST00000489235 288 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 Vault.1-201ENST00000516474 102 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 MIR6875-201ENST00000617506 72 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 U6.115-201ENST00000636045 103 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 MIR3914-2-201ENST00000637339 95 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-CQ95604 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-CQ95604 AL450345.1-202ENST00000605741 3881 ntBASIC4.79□□□□□ -1.64
HLA-CQ95604 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-CQ95604 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-CQ95604 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
HLA-CQ95604 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 USP8P1-201ENST00000494673 3183 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 RNU6-1010P-201ENST00000362757 107 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 RNA5SP189-201ENST00000364920 115 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AL139281.1-201ENST00000422120 335 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms