Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC018889.1-201ENST00000605372 397 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AL161629.2-201ENST00000615347 275 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RTF1Q92541 U6.99-201ENST00000637524 83 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTF1Q92541 CUL1P1-201ENST00000509510 2425 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 SNORA18.3-201ENST00000384122 132 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 RNU6-331P-201ENST00000384724 107 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 RPL26P27-201ENST00000414397 437 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.78□□□□□ -1.8
RTF1Q92541 AC011816.1-201ENST00000441346 546 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 AL031274.1-201ENST00000450334 232 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTF1Q92541 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.78□□□□□ -1.8
RTF1Q92541 RPL12P25-201ENST00000455592 494 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.78□□□□□ -1.8
RTF1Q92541 ACA59.1-201ENST00000515966 143 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 HMGB1P14-201ENST00000557424 591 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 AC024153.1-201ENST00000603103 365 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 AC083806.3-201ENST00000614016 455 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTF1Q92541 SCARNA4-202ENST00000625402 129 ntBASIC3.78□□□□□ -1.8
RTF1Q92541 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RTF1Q92541 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.78□□□□□ -1.81
RTF1Q92541 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RTF1Q92541 RNU6-778P-201ENST00000363269 103 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 Y_RNA.148-201ENST00000363557 117 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 RNU6-827P-201ENST00000365553 106 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 MIR888-201ENST00000401186 77 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTF1Q92541 AL513475.1-201ENST00000406602 315 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.77□□□□□ -1.81
RTF1Q92541 MCFD2P1-201ENST00000417812 300 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.77□□□□□ -1.81
RTF1Q92541 AC105272.1-201ENST00000438604 198 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 UQCRHP3-201ENST00000451503 251 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.77□□□□□ -1.81
RTF1Q92541 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.77□□□□□ -1.81
RTF1Q92541 MTND4LP22-201ENST00000508209 276 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTF1Q92541 CYCSP39-201ENST00000565821 309 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AMZ2P1-203ENST00000565833 850 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AC009314.1-201ENST00000603871 304 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 MIR6852-201ENST00000621699 66 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AC091925.1-201ENST00000623204 462 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 AC002546.1-201ENST00000588041 2504 ntBASIC3.77□□□□□ -1.81
RTF1Q92541 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTF1Q92541 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.76□□□□□ -1.81
RTF1Q92541 RPL9P7-201ENST00000330965 580 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 RNU6-1032P-201ENST00000384100 107 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 RNU6-72P-201ENST00000384285 79 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AC243428.1-201ENST00000421099 264 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.76□□□□□ -1.81
RTF1Q92541 HMGN2P30-201ENST00000423237 256 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AC087499.2-201ENST00000432861 149 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AL513043.1-201ENST00000439124 535 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 U8.21-201ENST00000459536 136 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 RPL9P9-202ENST00000466501 579 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AC022493.2-201ENST00000506122 481 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 RNU6-1183P-201ENST00000517054 60 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 RNU6-264P-201ENST00000517134 104 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.76□□□□□ -1.81
RTF1Q92541 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.76□□□□□ -1.81
RTF1Q92541 AC004852.3-201ENST00000614131 326 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 AC138627.2-201ENST00000624202 601 ntBASIC3.76□□□□□ -1.81
RTF1Q92541 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RTF1Q92541 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.76□□□□□ -1.81
RTF1Q92541 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RTF1Q92541 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.75□□□□□ -1.81
RTF1Q92541 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.75□□□□□ -1.81
RTF1Q92541 RNU6-1317P-201ENST00000364582 104 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 U8.8-201ENST00000365399 135 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 RNU1-73P-201ENST00000383971 164 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.75□□□□□ -1.81
RTF1Q92541 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.75□□□□□ -1.81
RTF1Q92541 RPL23AP50-201ENST00000434149 455 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.75□□□□□ -1.81
RTF1Q92541 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.75□□□□□ -1.81
RTF1Q92541 AC133134.1-201ENST00000466800 359 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.75□□□□□ -1.81
RTF1Q92541 SNORA25.10-201ENST00000515926 124 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 Y_RNA.687-201ENST00000516558 91 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 RNU6-699P-201ENST00000517081 110 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTF1Q92541 LINC00933-203ENST00000559812 219 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 SUB1P3-201ENST00000564581 315 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 MIR4474-201ENST00000579189 78 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 U4.7-201ENST00000638126 106 ntBASIC3.75□□□□□ -1.81
RTF1Q92541 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTF1Q92541 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.75□□□□□ -1.81
RTF1Q92541 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.75□□□□□ -1.81
RTF1Q92541 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTF1Q92541 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTF1Q92541 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
RTF1Q92541 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTF1Q92541 RNU5E-7P-201ENST00000365290 117 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 RNU1-115P-201ENST00000365329 160 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms