Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAF3IP1Q8TDR0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAF3IP1Q8TDR0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
TRAF3IP1Q8TDR0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAF3IP1Q8TDR0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-527P-201ENST00000363425 104 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-266P-201ENST00000364225 107 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 Y_RNA.481-201ENST00000384373 102 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC009238.1-201ENST00000442165 424 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC009237.6-201ENST00000446969 424 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC083798.1-201ENST00000472671 131 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC069113.1-201ENST00000517763 267 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 MTND4P7-201ENST00000523876 130 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AL138976.2-201ENST00000563989 694 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC093249.1-201ENST00000567049 203 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 APOOP1-201ENST00000604695 592 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC123912.5-201ENST00000605470 343 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC002044.1-201ENST00000606707 158 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 Z82243.1-201ENST00000609432 473 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 U2.17-201ENST00000611454 95 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AC139792.3-201ENST00000623525 224 ntBASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAF3IP1Q8TDR0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNA5SP289-201ENST00000362332 137 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 Y_RNA.194-201ENST00000363985 102 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-1322P-201ENST00000364309 107 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU4-24P-201ENST00000364565 139 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 FDX1P2-201ENST00000450769 375 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-261P-201ENST00000459506 102 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RN7SKP256-201ENST00000517201 314 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-586P-201ENST00000517265 104 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC118273.2-201ENST00000532092 465 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 MIR5583-1-201ENST00000580941 59 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC091135.1-201ENST00000585943 307 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 BNIP3P16-201ENST00000589779 534 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC097065.2-201ENST00000608159 533 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 uc_338.34-201ENST00000617467 174 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AC124864.2-201ENST00000624736 186 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAF3IP1Q8TDR0 RPS29P13-201ENST00000402041 169 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 TIMM9P3-201ENST00000428659 274 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 VN1R108P-201ENST00000431580 830 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 GPM6BP3-201ENST00000442797 145 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 RPL39P29-201ENST00000447779 157 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 RPL30P1-201ENST00000488676 339 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 CYCSP27-201ENST00000527643 293 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 AC090115.3-201ENST00000553218 849 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 MIR6863-201ENST00000636112 90 ntBASIC2.28□□□□□ -2.04
TRAF3IP1Q8TDR0 RNU6-212P-201ENST00000362642 104 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 Y_RNA.559-201ENST00000384686 107 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AL606923.1-201ENST00000406616 190 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AL117339.3-201ENST00000418733 162 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 USP9YP18-201ENST00000425912 695 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AC243964.1-201ENST00000441814 261 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 USP9YP8-201ENST00000441913 500 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AL031659.1-201ENST00000447075 539 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 PSPHP1-201ENST00000450062 261 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 RPL30P12-201ENST00000474666 353 ntBASIC2.27□□□□□ -2.05
TRAF3IP1Q8TDR0 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms