Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AC138915.1-201ENST00000565427 1685 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 Y_RNA.114-201ENST00000363265 113 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 Y_RNA.229-201ENST00000364347 113 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RNA5SP513-201ENST00000364648 118 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RNY3P5-201ENST00000384127 102 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 MIR3065-201ENST00000390137 79 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RNU6ATAC-201ENST00000408749 126 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-710P-201ENST00000410424 105 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RNA5SP31-201ENST00000411144 127 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 RPL26P27-201ENST00000414397 437 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 FTH1P6-201ENST00000430768 320 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AL049874.1-201ENST00000489560 388 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AC107016.1-201ENST00000550463 337 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AL121603.1-201ENST00000553815 142 ntBASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-3Q8TAU0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 NOL8P1-201ENST00000508336 3529 ntBASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 AL596211.1-201ENST00000569873 2277 ntBASIC5.15□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-324P-201ENST00000363957 106 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP173-201ENST00000364857 136 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP283-201ENST00000365604 119 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AC245047.4-201ENST00000433189 144 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 PRSS3P4-201ENST00000453323 162 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-412P-201ENST00000516434 106 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP290-201ENST00000517133 127 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AP004607.1-201ENST00000524456 203 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AP001318.4-201ENST00000616637 121 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 MIR8059-201ENST00000620427 81 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AC007546.2-201ENST00000623996 360 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 MIR1245B-201ENST00000636115 69 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 AL592182.3-201ENST00000642132 3304 ntBASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-3Q8TAU0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP307-201ENST00000362863 116 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 Y_RNA.346-201ENST00000365385 112 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 MIR449B-201ENST00000384995 97 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 SNORD66.1-201ENST00000391230 76 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 RPL21P17-201ENST00000397467 475 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP296-201ENST00000410523 111 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 SNORA74C-2-201ENST00000411179 201 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 GPM6BP3-201ENST00000442797 145 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 Y_RNA.649-201ENST00000459077 103 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC016632.1-201ENST00000503994 196 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 SCARNA15.2-201ENST00000516409 127 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 IGLV3-26-201ENST00000520756 302 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC113403.1-201ENST00000604910 193 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AL136164.4-201ENST00000625013 2135 ntBASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-3Q8TAU0 AC073073.2-201ENST00000609827 2578 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms