Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 RNU7-167P-201ENST00000459160 62 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AC079140.5-201ENST00000507882 310 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 SNORA31.23-201ENST00000517219 133 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AL512360.1-201ENST00000555346 234 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 MIR5571-201ENST00000577998 113 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AL121917.1-203ENST00000605534 577 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-6P-201ENST00000606623 107 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AC002044.1-201ENST00000606707 158 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 Z82243.1-201ENST00000609432 473 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 U2.17-201ENST00000611454 95 ntBASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
C9orf40Q8IXQ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 OR56A5-201ENST00000340110 738 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AC074117.2-201ENST00000417130 397 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 WARS2P1-201ENST00000429678 537 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AP001025.1-201ENST00000486139 332 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AC019235.1-201ENST00000503847 207 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 HMGB3P3-201ENST00000510526 400 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 RNA5SP401-201ENST00000515920 127 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-506P-201ENST00000516553 94 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 SNORA25.17-201ENST00000517184 124 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AC027807.1-201ENST00000559921 996 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AC136619.2-201ENST00000563361 631 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MIR3945-201ENST00000581853 98 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MIR3941-201ENST00000582572 103 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 MIR4424-201ENST00000585257 86 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 AL449363.1-201ENST00000617815 186 ntBASIC1.98□□□□□ -2.09
C9orf40Q8IXQ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 MIRLET7G-201ENST00000362280 84 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 SNORD56.1-201ENST00000362913 68 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-266P-201ENST00000364225 107 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-622P-201ENST00000384272 103 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-780P-201ENST00000391030 104 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RPS3AP44-201ENST00000425466 790 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AL121601.2-201ENST00000438019 707 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RPS29P21-201ENST00000496272 170 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 CCDC34P1-201ENST00000507441 517 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-314P-201ENST00000516574 104 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-835P-201ENST00000516974 104 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC022880.1-201ENST00000534017 973 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC023050.3-201ENST00000541142 333 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC123912.5-201ENST00000605470 343 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC012557.2-201ENST00000605919 418 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 AC092954.2-201ENST00000609103 430 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 U4.7-201ENST00000638126 106 ntBASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
C9orf40Q8IXQ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-527P-201ENST00000363425 104 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 SNORA51.11-201ENST00000384442 131 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 RNA5SP390-201ENST00000410191 113 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 EIF4EP4-201ENST00000424916 578 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 MTCO3P38-201ENST00000468910 766 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms