Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC104136.1-201ENST00000512969 394 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1178P-201ENST00000516674 107 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 MIR4648-201ENST00000580107 72 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 SEPT7P9-203ENST00000604116 343 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AL132822.1-201ENST00000617063 513 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 Z69720.2-201ENST00000624755 279 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1097P-201ENST00000363586 107 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1303P-201ENST00000364841 107 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1029P-201ENST00000384109 107 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 SNORA70B-201ENST00000384210 135 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC019129.1-201ENST00000403786 261 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 MIR1262-201ENST00000408276 93 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AL669831.1-202ENST00000428504 417 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AL645568.3-201ENST00000433683 316 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 GTF2IP13-201ENST00000438487 386 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RPL32P28-201ENST00000443577 397 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RPL39P29-201ENST00000447779 157 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC079448.1-201ENST00000449377 373 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AL122001.1-201ENST00000457027 370 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RPS29P15-201ENST00000458329 171 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNU7-182P-201ENST00000459009 62 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 MTND3P7-201ENST00000474435 343 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 MTCO3P28-201ENST00000513351 515 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-965P-201ENST00000516721 96 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RNA5SP503-201ENST00000517047 117 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 RN7SKP256-201ENST00000517201 314 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 HSPE1P18-201ENST00000517602 280 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC145350.1-201ENST00000567426 208 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC104581.2-201ENST00000572227 430 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC245014.2-201ENST00000603689 287 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC246785.4-201ENST00000605374 287 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 AC006566.1-201ENST00000608943 513 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 SEPT14P19-203ENST00000633205 211 ntBASIC1.72□□□□□ -2.13
NUDCD3Q8IVD9 U3.4-201ENST00000363352 213 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-527P-201ENST00000363425 104 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-611P-201ENST00000384276 104 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 USP9YP18-201ENST00000425912 695 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL591043.1-201ENST00000432461 424 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL596276.1-201ENST00000434465 418 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RPL30P1-201ENST00000488676 339 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC022616.8-201ENST00000533569 253 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AC091135.1-201ENST00000585943 307 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL136363.2-201ENST00000604173 851 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 Z94722.1-201ENST00000604328 474 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 U4.7-201ENST00000638126 106 ntBASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-37P-201ENST00000362692 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 Y_RNA.201-201ENST00000364052 96 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-11P-201ENST00000364234 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU4-91P-201ENST00000364778 135 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNA5SP126-201ENST00000365092 109 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 Y_RNA.324-201ENST00000365165 102 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-25P-201ENST00000383873 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-1-201ENST00000383898 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-48P-201ENST00000384161 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-36P-201ENST00000384172 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-4P-201ENST00000384205 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-5P-201ENST00000384238 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-3P-201ENST00000384314 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-16P-201ENST00000384385 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-15P-201ENST00000384534 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 SNORA8-201ENST00000384574 139 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-2-201ENST00000384627 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-29P-201ENST00000384637 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-9-201ENST00000384776 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-33P-201ENST00000384793 107 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 MIR544A-201ENST00000384855 91 ntBASIC1.7□□□□□ -2.14
NUDCD3Q8IVD9 MIR29B2-201ENST00000385055 81 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms