Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.27-201ENST00000362540 103 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU6-545P-201ENST00000362681 104 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.200-201ENST00000364018 102 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU6-17P-201ENST00000384245 107 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU6-662P-201ENST00000384253 104 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU6-18P-201ENST00000384527 107 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 U8.11-201ENST00000384699 133 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 U8.12-201ENST00000384701 133 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 SNORA3.3-201ENST00000408712 125 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RPL23AP22-201ENST00000437556 453 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 U8.18-201ENST00000459285 133 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC091874.1-201ENST00000511402 339 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 SNORA31.6-201ENST00000516241 130 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU6-1338P-201ENST00000516328 91 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU1-95P-201ENST00000516357 160 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 RNU1-128P-201ENST00000516704 160 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC136932.1-201ENST00000574771 208 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC087499.8-201ENST00000578406 226 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 BX284668.6-201ENST00000606899 438 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 MIR376A1-201ENST00000616574 68 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 U6.98-201ENST00000637157 84 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 AC006504.1-201ENST00000562493 3666 ntBASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 RNU6-1266P-201ENST00000362794 105 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.464-201ENST00000384282 110 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 UBA52P6-201ENST00000399822 382 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 MIR1298-201ENST00000408783 112 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AC093578.1-201ENST00000415219 368 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AC087190.1-201ENST00000484462 480 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AC107032.1-201ENST00000485945 480 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 SCARNA24.2-201ENST00000516968 130 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 MIR4643-201ENST00000577473 78 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 MIR3136-201ENST00000583498 78 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AC010620.2-201ENST00000600135 313 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AL391813.1-201ENST00000603098 260 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPAS4Q8IUM7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 SNORD114-19-201ENST00000363072 75 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP399-201ENST00000364003 117 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 SNORA5A-201ENST00000384111 134 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 RNU6-493P-201ENST00000391321 108 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.793-201ENST00000411222 111 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC091286.1-201ENST00000431233 461 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 Z82188.1-201ENST00000436709 154 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 PRSS3P4-201ENST00000453323 162 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 RPL7P49-201ENST00000471402 708 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 RN7SL271P-201ENST00000487601 295 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC100770.1-201ENST00000532310 322 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AL442163.3-201ENST00000554110 156 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 MIR4300-201ENST00000581016 96 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 RPS15AP11-201ENST00000594193 385 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC012493.2-201ENST00000595083 291 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC084757.4-201ENST00000616350 526 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 XIST_intron.1-201ENST00000619444 68 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 SNORA43.4-201ENST00000629559 138 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AL034408.1-202ENST00000636088 415 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 AC073073.2-201ENST00000609827 2578 ntBASIC4.28□□□□□ -1.72
NPAS4Q8IUM7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 Y_RNA.143-201ENST00000363520 106 ntBASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 RNU5F-3P-201ENST00000363767 117 ntBASIC4.27□□□□□ -1.73
NPAS4Q8IUM7 RNA5SP139-201ENST00000364340 117 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms