Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC106871.1-201ENST00000568324 3102 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.7-201ENST00000362352 102 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 SNORA63.1-201ENST00000362493 131 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.101-201ENST00000363154 102 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RNU6-487P-201ENST00000365430 104 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RNU6-211P-201ENST00000384047 107 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RNU6-622P-201ENST00000384272 103 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AL356095.1-201ENST00000417217 199 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 BPY2DP-201ENST00000422208 265 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RAB28P5-201ENST00000427490 651 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 MTND4LP9-201ENST00000427694 174 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 HMGB1P37-201ENST00000439613 609 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 RPS27AP9-201ENST00000477681 438 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 PDCD5P2-201ENST00000507570 312 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 SNORA31.16-201ENST00000516773 139 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC011602.1-201ENST00000546484 331 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 MIR6867-201ENST00000610636 67 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC004825.2-201ENST00000616634 455 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC092628.2-201ENST00000622492 339 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 MIR4679-1-201ENST00000637619 75 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC092593.1-201ENST00000515413 1815 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 AC068254.2-201ENST00000623938 3577 ntBASIC4.69□□□□□ -1.66
RNF135Q8IUD6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF135Q8IUD6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.75-201ENST00000362927 97 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.238-201ENST00000364441 102 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RNU6-793P-201ENST00000384233 104 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.498-201ENST00000384460 102 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RNU2-2P-201ENST00000410396 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC099548.1-201ENST00000421443 426 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC019205.3-201ENST00000424573 156 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 YME1L1P1-201ENST00000429435 297 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 GOT2P5-201ENST00000433995 546 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AL162151.2-201ENST00000448875 158 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC007215.1-201ENST00000464893 276 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AL121594.1-201ENST00000475906 575 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RPS4XP13-201ENST00000483219 789 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 ACA59.2-201ENST00000517061 156 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 SUMO2P18-201ENST00000518873 252 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 TRAV8-5-201ENST00000537369 341 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 MIR3145-201ENST00000580727 82 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RNU2-4P-201ENST00000606190 192 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.15-201ENST00000611544 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.16-201ENST00000613119 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.12-201ENST00000613778 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.9-201ENST00000615427 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC004467.1-201ENST00000615678 330 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.11-201ENST00000616345 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.2-201ENST00000616535 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.3-201ENST00000617785 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.19-201ENST00000618602 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RNU2-1-201ENST00000618664 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.6-201ENST00000619225 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.5-201ENST00000619465 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 U2.10-201ENST00000620268 191 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 snoU18.1-201ENST00000629629 71 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AF117829.1-206ENST00000621883 3802 ntBASIC4.68□□□□□ -1.66
RNF135Q8IUD6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF135Q8IUD6 AC099654.7-201ENST00000635788 2127 ntBASIC4.67□□□□□ -1.66
RNF135Q8IUD6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF135Q8IUD6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
RNF135Q8IUD6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms