Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 MRPS10P2-201ENST00000431226 381 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB1Q86U70 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.51□□□□□ -2.01
LDB1Q86U70 AK3P2-201ENST00000507976 429 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.51□□□□□ -2.01
LDB1Q86U70 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.51□□□□□ -2.01
LDB1Q86U70 AP000763.2-201ENST00000540641 163 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 BNIP3P16-201ENST00000589779 534 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 AC097372.5-201ENST00000623665 376 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
LDB1Q86U70 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LDB1Q86U70 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LDB1Q86U70 Y_RNA.100-201ENST00000363141 102 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 Y_RNA.530-201ENST00000384587 101 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 MIR196B-201ENST00000384852 84 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 RPS29P13-201ENST00000402041 169 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB1Q86U70 RNU2-23P-201ENST00000410545 195 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 RNU6-293P-201ENST00000411259 106 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB1Q86U70 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB1Q86U70 EIF4EP4-201ENST00000424916 578 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 NDUFA5P4-201ENST00000436704 385 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB1Q86U70 MTATP6P13-201ENST00000438531 667 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 MTCO2P3-201ENST00000442543 421 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB1Q86U70 FGF7P6-202ENST00000451282 293 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC007547.1-201ENST00000462177 490 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB1Q86U70 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB1Q86U70 AC103996.1-201ENST00000555468 102 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 SNORA59B-202ENST00000578183 701 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB1Q86U70 uc_338.15-201ENST00000615470 191 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LDB1Q86U70 AC002543.1-201ENST00000299783 1954 ntBASIC2.5□□□□□ -2.01
LDB1Q86U70 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB1Q86U70 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB1Q86U70 Y_RNA.157-201ENST00000363638 102 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 SNORD113-7-201ENST00000363762 77 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 SNORD73A-201ENST00000386062 65 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.49□□□□□ -2.01
LDB1Q86U70 RPS15AP10-201ENST00000432472 382 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB1Q86U70 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB1Q86U70 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB1Q86U70 AC243964.1-201ENST00000441814 261 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AL359672.1-201ENST00000442302 409 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC104389.3-201ENST00000445629 235 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB1Q86U70 AP005597.4-201ENST00000526762 229 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.49□□□□□ -2.01
LDB1Q86U70 AC025423.5-201ENST00000550230 219 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 PSMA3P-201ENST00000555485 635 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC023824.2-201ENST00000566185 400 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 MIR5571-201ENST00000577998 113 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AL356575.1-201ENST00000603008 283 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC107304.1-201ENST00000604229 296 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 AC092608.2-201ENST00000624427 218 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB1Q86U70 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
LDB1Q86U70 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB1Q86U70 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LDB1Q86U70 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB1Q86U70 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
LDB1Q86U70 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LDB1Q86U70 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.48□□□□□ -2.01
LDB1Q86U70 RNU6-254P-201ENST00000363377 107 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LDB1Q86U70 RNU6-214P-201ENST00000384130 107 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 MIR544A-201ENST00000384855 91 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 MIR186-201ENST00000384988 86 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 MIR450B-201ENST00000401182 78 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 AL162578.1-201ENST00000406202 378 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 AC009161.1-201ENST00000417306 376 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.48□□□□□ -2.01
LDB1Q86U70 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.48□□□□□ -2.01
LDB1Q86U70 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.48□□□□□ -2.01
LDB1Q86U70 RPL39P29-201ENST00000447779 157 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 RNU6-1037P-201ENST00000459571 107 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 AC073901.1-201ENST00000462471 408 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 RPL30P12-201ENST00000474666 353 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 RPS27P27-201ENST00000498779 255 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 TRBVA-201ENST00000498804 316 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 MTCYBP18-201ENST00000501056 747 ntBASIC2.48□□□□□ -2.01
LDB1Q86U70 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms