Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 snoU13.26-201ENST00000459452 105 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 MTND5P13-201ENST00000513046 1079 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 RNA5SP490-201ENST00000517141 136 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC069113.3-201ENST00000521019 150 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC104229.1-201ENST00000561364 255 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 MIR5000-201ENST00000577717 103 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC068620.3-201ENST00000602749 560 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AC022022.2-201ENST00000602989 360 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 AL162730.1-201ENST00000605734 292 ntBASIC-0.38□□□□□ -2.47
LINC00643Q86TS7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 SNORD114-22-201ENST00000365423 72 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 SNORD116-13-201ENST00000384408 92 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AC073261.1-201ENST00000429409 121 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 USP9YP14-201ENST00000430663 563 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 MTND3P4-201ENST00000453537 303 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 RPF2P2-201ENST00000504693 896 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 BNIP3P24-201ENST00000593398 557 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 VN1R83P-201ENST00000595685 445 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AL353778.1-201ENST00000603149 408 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AL358072.1-201ENST00000604156 575 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 AL139344.1-201ENST00000605228 195 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 LINC00216-201ENST00000623548 1126 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 SCARNA15.3-201ENST00000626315 122 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 SCARNA4.1-201ENST00000628597 123 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.39□□□□□ -2.47
LINC00643Q86TS7 RNU6-877P-201ENST00000383868 107 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC000111.3-201ENST00000433478 193 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC073910.1-201ENST00000445047 438 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AL513124.1-201ENST00000450410 614 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 RNU7-34P-201ENST00000459394 64 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 HMGB1P29-201ENST00000505659 499 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 RNU6-416P-201ENST00000516265 103 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 RNU6-922P-201ENST00000516753 99 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC022523.2-201ENST00000561045 150 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC136618.2-201ENST00000575091 400 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 MIR4782-201ENST00000577987 79 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 MIR3678-201ENST00000578455 94 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AL513534.2-201ENST00000603836 250 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC006270.3-201ENST00000605967 1036 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC090517.2-201ENST00000614966 680 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 AC002550.2-201ENST00000621246 394 ntBASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.4□□□□□ -2.47
LINC00643Q86TS7 RNU6-862P-201ENST00000362804 105 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 SNORA4.2-201ENST00000365313 147 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 RNU6-793P-201ENST00000384233 104 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AP000275.1-201ENST00000411943 390 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 ISCA1P1-201ENST00000426679 387 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 RPL23AP95-201ENST00000426806 265 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 MTND1P30-201ENST00000441241 901 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 Z73417.1-201ENST00000447373 778 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AL353752.1-201ENST00000454946 260 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AC092991.1-201ENST00000477176 376 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 FABP5P5-201ENST00000515537 406 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 RNU4-77P-201ENST00000516692 156 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AL391001.1-201ENST00000602747 715 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 AC078795.2-201ENST00000602835 1252 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
LINC00643Q86TS7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 SNORA63.3-201ENST00000362682 132 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 RNU6-637P-201ENST00000384050 107 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 RNU6-815P-201ENST00000384080 113 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 SNORA75.2-201ENST00000391138 150 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 MTND2P21-201ENST00000436242 1042 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 FTH1P25-201ENST00000447665 469 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 BTF3P15-201ENST00000455606 336 ntBASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC00643Q86TS7 snoU13.25-201ENST00000458945 104 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms