Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL591034.3-201ENST00000605511 685 ntBASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 MIR6716-201ENST00000613413 80 ntBASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 BX322639.1-202ENST00000423987 2213 ntBASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UBE3DQ7Z6J8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC002543.1-201ENST00000299783 1954 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 MTND5P35-201ENST00000557537 1720 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 Y_RNA.179-201ENST00000363844 90 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 RNA5SP167-201ENST00000365461 116 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 RNU6-622P-201ENST00000384272 103 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 PTMAP5-201ENST00000393073 333 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 MIR320B2-201ENST00000408479 138 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 OOSP1P1-201ENST00000423265 274 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC010095.1-201ENST00000443543 144 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 RPL39P29-201ENST00000447779 157 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 RNU6-625P-201ENST00000459412 107 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 SNRPGP7-201ENST00000469016 106 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 SNORA31.9-201ENST00000516429 84 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC018448.1-201ENST00000552843 316 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 MIR3136-201ENST00000583498 78 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3DQ7Z6J8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 MAPK10-253ENST00000641010 4072 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RNA5SP130-201ENST00000364431 114 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 SNORA62-201ENST00000365493 153 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RNU6-793P-201ENST00000384233 104 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RN7SKP51-201ENST00000410781 304 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 BMS1P22-201ENST00000414726 313 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 CYCSP48-201ENST00000417124 323 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 FTH1P6-201ENST00000430768 320 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AC021739.1-201ENST00000559631 174 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 MIR3690-201ENST00000580266 75 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AL357075.2-201ENST00000614906 189 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AL773545.4-201ENST00000637262 310 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AL513478.4-201ENST00000641636 310 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 AC099654.7-201ENST00000635788 2127 ntBASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3DQ7Z6J8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 RNA5SP443-201ENST00000363083 132 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 RNU4-56P-201ENST00000364700 142 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 RNU6-923P-201ENST00000364753 107 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 SNORA36A-201ENST00000384221 132 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 RNU6-804P-201ENST00000384286 107 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 MIR487A-201ENST00000385009 80 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 Y_RNA.580-201ENST00000391004 95 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 AL356095.1-201ENST00000417217 199 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 BPY2DP-201ENST00000422208 265 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.85□□□□□ -1.79
UBE3DQ7Z6J8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms